BLASTX nr result
ID: Atractylodes21_contig00050234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00050234
(298 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535423.1| pentatricopeptide repeat-containing protein,... 107 8e-22
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera] 103 2e-20
ref|XP_002523995.1| pentatricopeptide repeat-containing protein,... 95 5e-18
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ... 91 7e-17
>ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223523164|gb|EEF26960.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 107 bits (268), Expect = 8e-22
Identities = 49/92 (53%), Positives = 68/92 (73%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
SL+SGYSA+ W+EALE +Y+ R AG+ PD+F +SS+LPAC G+ + EG+++HGL KL
Sbjct: 104 SLISGYSANGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKL 163
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
G+++D NGLLSMY K L D RVF++M
Sbjct: 164 GMNIDVIMSNGLLSMYFKFGRLMDAQRVFNKM 195
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +1
Query: 49 EEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKLGIDVDTRAC 228
E+ A Q R + PD + +LP CS + +G+ VH + K G +
Sbjct: 414 EDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVG 473
Query: 229 NGLLSMYLKCNNLEDCHRVFDEM 297
N L+ MY KC+NL+ C RVF++M
Sbjct: 474 NALIEMYSKCSNLKYCIRVFEDM 496
>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 103 bits (256), Expect = 2e-20
Identities = 49/92 (53%), Positives = 64/92 (69%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
SL+SGY+A+ W EALE +Y+ R GV PDS+ +SS+L AC G+G + EG ++HGL K+
Sbjct: 186 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 245
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
GI D NGLLSMY K N L D R+FD+M
Sbjct: 246 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 277
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 49 EEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKLGIDVDTRAC 228
E+ L + RT GVTPD + S+LP CS + +G+ +HG KLG++ D
Sbjct: 496 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 555
Query: 229 NGLLSMYLKCNNLEDCHRVFDEM 297
N L+ MY KC +L + +VF M
Sbjct: 556 NVLIEMYSKCGSLRNSFQVFKLM 578
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
+++ GYS +EE+++ F + PD ++S+L AC +G + G+ VH
Sbjct: 287 TMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITS 345
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
G + DT A N L++MY KC NL VF M
Sbjct: 346 GYECDTTASNILINMYAKCGNLLASQEVFSGM 377
>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 103 bits (256), Expect = 2e-20
Identities = 49/92 (53%), Positives = 64/92 (69%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
SL+SGY+A+ W EALE +Y+ R GV PDS+ +SS+L AC G+G + EG ++HGL K+
Sbjct: 245 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKI 304
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
GI D NGLLSMY K N L D R+FD+M
Sbjct: 305 GIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKM 336
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 49 EEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKLGIDVDTRAC 228
E+ L + RT GVTPD + S+LP CS + +G+ +HG KLG++ D
Sbjct: 555 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 614
Query: 229 NGLLSMYLKCNNLEDCHRVFDEM 297
N L+ MY KC +L + +VF M
Sbjct: 615 NVLIEMYSKCGSLRNSFQVFKLM 637
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
+++ GYS +EE+++ F + PD ++S+L AC +G + G+ VH
Sbjct: 346 TMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITS 404
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
G + DT A N L++MY KC NL VF M
Sbjct: 405 GYECDTTASNILINMYAKCGNLLASQEVFSGM 436
>ref|XP_002523995.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536722|gb|EEF38363.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 212
Score = 95.1 bits (235), Expect = 5e-18
Identities = 43/84 (51%), Positives = 61/84 (72%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
SL+SGYSA+ W+EALE +Y+ R AG+ PD+F +SS+LPAC G+ + EG+++HGL KL
Sbjct: 81 SLISGYSANGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKL 140
Query: 202 GIDVDTRACNGLLSMYLKCNNLED 273
G+++D NGLLSM + ED
Sbjct: 141 GMNIDVIMSNGLLSMSFQSGGSED 164
>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330236|gb|EFH60655.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 882
Score = 91.3 bits (225), Expect = 7e-17
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +1
Query: 22 SLVSGYSAHEEWEEALEAFYQSRTAGVTPDSFMVSSLLPACSGVGVIMEGQMVHGLSHKL 201
SL+SGYS+H +EEALE +++ R + + PDSF VSS+LPA + + V+ +GQ +HG + K
Sbjct: 177 SLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKS 236
Query: 202 GIDVDTRACNGLLSMYLKCNNLEDCHRVFDEM 297
G++ + NGLL+MYLK + D RVFDEM
Sbjct: 237 GVNSVSVVNNGLLAMYLKFSRPTDARRVFDEM 268