BLASTX nr result

ID: Atractylodes21_contig00050195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050195
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297813.1| f-box family protein [Populus trichocarpa] g...    63   2e-08
gb|ABK94787.1| unknown [Populus trichocarpa]                           63   2e-08
ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002876814.1| hypothetical protein ARALYDRAFT_322564 [Arab...    57   1e-06
emb|CBI38318.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002297813.1| f-box family protein [Populus trichocarpa]
           gi|222845071|gb|EEE82618.1| f-box family protein
           [Populus trichocarpa]
          Length = 243

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
 Frame = -2

Query: 319 TKKELHFLLCKG-FLIHNGEEWFSLANNG-RKCHMIPARA-ALEEGDV----IFKPLPE- 164
           +KKEL+F LC    L++NG   F+L  +G +KC+MI AR  ++  GD      +KPLP+ 
Sbjct: 71  SKKELYFHLCNNPILVNNGIMSFALEKHGGKKCYMIGARGLSITWGDTPDYWTWKPLPDQ 130

Query: 163 SRFEEVALVR-CRYLSIICNIKPELLSPQTTYACYLVYNIAKKHSNF 26
           SRF EVA +R   +L +   I  ++ SP+TTYA YLV+ +      F
Sbjct: 131 SRFSEVAELRYVWWLDVRGRIDAKIFSPKTTYAAYLVFKLTDSTRGF 177


>gb|ABK94787.1| unknown [Populus trichocarpa]
          Length = 267

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
 Frame = -2

Query: 319 TKKELHFLLCKG-FLIHNGEEWFSLANNG-RKCHMIPARA-ALEEGDV----IFKPLPE- 164
           +KKEL+F LC    L++NG   F+L  +G +KC+MI AR  ++  GD      +KPLP+ 
Sbjct: 71  SKKELYFHLCNNPILVNNGIMSFALEKHGGKKCYMIGARGLSITWGDTPDYWTWKPLPDQ 130

Query: 163 SRFEEVALVR-CRYLSIICNIKPELLSPQTTYACYLVYNIAKKHSNF 26
           SRF EVA +R   +L +   I  ++ SP+TTYA YLV+ +      F
Sbjct: 131 SRFSEVAELRYVWWLDVRGRIDAKIFSPKTTYAAYLVFKLTDSTRGF 177


>ref|XP_002318973.1| predicted protein [Populus trichocarpa] gi|222857349|gb|EEE94896.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
 Frame = -2

Query: 319 TKKELHFLLCKGFLIHNGEEWFSLA-NNGRKCHMIPARA-----ALEEGDVIFKPLPESR 158
           +KKEL  LLC   LI  G++ F L  ++G+K  M+ AR      + E     +  LPESR
Sbjct: 73  SKKELFLLLCNSLLIDGGKKSFKLERSSGKKSFMLSARDLHITWSDESPYWHWASLPESR 132

Query: 157 FEEVALVRCR-YLSIICNIKPELLSPQTTYACYLVYNIAKK 38
           F EVA++R   +L I+  IK ++L+P T Y  YLV  I  +
Sbjct: 133 FSEVAVLRTMCWLEIVGMIKTQMLTPNTKYGAYLVLKITDR 173


>ref|XP_002876814.1| hypothetical protein ARALYDRAFT_322564 [Arabidopsis lyrata subsp.
           lyrata] gi|297322652|gb|EFH53073.1| hypothetical protein
           ARALYDRAFT_322564 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
 Frame = -2

Query: 319 TKKELHFLLCKG-FLIHNGE--EWFSLANNGRKCHMIPARAALE---EGDVIFK----PL 170
           +KKEL+F LC    LIH+G+   W   A+ G++C M  A A +     GD+  +    P+
Sbjct: 84  SKKELYFSLCDDPLLIHDGKLSVWLEKAS-GKRCVMYSATAMMNFSSMGDIFQRFEWIPI 142

Query: 169 PESRFEEVALVR--CRYLSIICNIKPELLSPQTTYACYLVYNIAKKHSNFLA 20
           PE+RFE VA +R  C++    C +   +LSP+T Y+ Y+V+  A     F A
Sbjct: 143 PEARFETVAQLREACKF-KFNCRMNTRVLSPRTRYSVYIVFKKADTCCGFKA 193


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
 Frame = -2

Query: 319 TKKELHFLLCK-GFLIHNGEEWFSLAN-NGRKCHMIPARA-ALEEGDVI----FKPLPES 161
           +KKEL+F LC    LI  G++ F L   +G+KC+M+ +R   +  GD      +  LPES
Sbjct: 86  SKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPES 145

Query: 160 RFEEVALVRCRYLSIIC------NIKPELLSPQTTYACYLVYNIAKKH 35
           RF EVA     YL  +C       I   +LSP+T YA YLV++  + H
Sbjct: 146 RFPEVA-----YLQAVCWFEIRGKINTCMLSPRTNYAAYLVFHAGRSH 188


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