BLASTX nr result

ID: Atractylodes21_contig00050145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050145
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26129.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266...   127   7e-28
ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002516852.1| pax transcription activation domain interact...   104   9e-21
ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   103   1e-20

>emb|CBI26129.3| unnamed protein product [Vitis vinifera]
          Length = 1055

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/143 (48%), Positives = 102/143 (71%), Gaps = 2/143 (1%)
 Frame = +2

Query: 47   DNQHSVHGNGNGQAFTLPCSGGAKANPRLEGS--LRERIEPIPSACTTPLSRGTPVKESS 220
            D++ +   NG G+   L C   ++ +  LEG+  LRE  +P  S CTTP++  TP   +S
Sbjct: 716  DSKLTAISNG-GKMDALSCPKQSRTHRNLEGNAGLREMCKPSGSVCTTPVNSVTPTNAAS 774

Query: 221  PICMGDEYLKQSCRKSRIRSSLIQEVLSLDPTGAGLISPTKDTRKRRDMSLICVLFSRHL 400
            P+CMG+EY+KQSC+K+ +R+SL++E+ +L  TG G  S  KD+R+RR++S + VLFS+HL
Sbjct: 775  PVCMGNEYVKQSCKKN-LRTSLLKEINNLTDTGPGPTSAVKDSRRRREISNVRVLFSQHL 833

Query: 401  DGDIVKQQKKILSRLGASESSSM 469
            D DI+KQQKKIL+RLG S +SS+
Sbjct: 834  DDDIIKQQKKILTRLGVSVASSI 856


>ref|XP_002276974.2| PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
          Length = 1294

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/137 (48%), Positives = 94/137 (68%)
 Frame = +2

Query: 59   SVHGNGNGQAFTLPCSGGAKANPRLEGSLRERIEPIPSACTTPLSRGTPVKESSPICMGD 238
            S H  GN  A     + G + N      LRE  +P  S CTTP++  TP   +SP+CMG+
Sbjct: 966  SKHSEGNSDADPSSPAEGREGN----AGLREMCKPSGSVCTTPVNSVTPTNAASPVCMGN 1021

Query: 239  EYLKQSCRKSRIRSSLIQEVLSLDPTGAGLISPTKDTRKRRDMSLICVLFSRHLDGDIVK 418
            EY+KQSC+K+ +R+SL++E+ +L  TG G  S  KD+R+RR++S + VLFS+HLD DI+K
Sbjct: 1022 EYVKQSCKKN-LRTSLLKEINNLTDTGPGPTSAVKDSRRRREISNVRVLFSQHLDDDIIK 1080

Query: 419  QQKKILSRLGASESSSM 469
            QQKKIL+RLG S +SS+
Sbjct: 1081 QQKKILTRLGVSVASSI 1097


>ref|XP_002314392.1| predicted protein [Populus trichocarpa] gi|222863432|gb|EEF00563.1|
            predicted protein [Populus trichocarpa]
          Length = 1102

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/115 (50%), Positives = 75/115 (65%)
 Frame = +2

Query: 125  PRLEGSLRERIEPIPSACTTPLSRGTPVKESSPICMGDEYLKQSCRKSRIRSSLIQEVLS 304
            P  +   RE+ +   SAC +P    TPV  +SP+CMG EY KQSCRK+  R+ L++E+ S
Sbjct: 831  PSSDNLSREKTKSYESACASPGICMTPVNAASPVCMGSEY-KQSCRKNLSRACLVKEMSS 889

Query: 305  LDPTGAGLISPTKDTRKRRDMSLICVLFSRHLDGDIVKQQKKILSRLGASESSSM 469
            L     G IS  KDTRKRRD+S + V FS HLD DI+KQQ+KI  RL  S +SS+
Sbjct: 890  LCAAWTGPISEPKDTRKRRDLSDVRVFFSHHLDEDILKQQRKIADRLKVSIASSI 944


>ref|XP_002516852.1| pax transcription activation domain interacting protein, putative
            [Ricinus communis] gi|223543940|gb|EEF45466.1| pax
            transcription activation domain interacting protein,
            putative [Ricinus communis]
          Length = 1178

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/109 (48%), Positives = 76/109 (69%)
 Frame = +2

Query: 143  LRERIEPIPSACTTPLSRGTPVKESSPICMGDEYLKQSCRKSRIRSSLIQEVLSLDPTGA 322
            L+E  EP  S C +P++  T V   SP+C+GDE LK+SC+KS  RS L++E+ SL  TG 
Sbjct: 873  LKEATEPSKSKCVSPVNFTTSVNAVSPVCIGDESLKRSCQKSLSRSCLMREISSLCATGR 932

Query: 323  GLISPTKDTRKRRDMSLICVLFSRHLDGDIVKQQKKILSRLGASESSSM 469
              IS  K++R+RRD+S + V+FS HLD DI+KQQ+KI+ RL  + + S+
Sbjct: 933  EPISSPKESRRRRDLSNVRVMFSHHLDEDIIKQQRKIVERLKLATALSI 981


>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
            gi|355483067|gb|AES64270.1| Mediator of DNA damage
            checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/107 (48%), Positives = 75/107 (70%), Gaps = 8/107 (7%)
 Frame = +2

Query: 173  ACTTPLSRGTPVKESSPICMGDEYLKQSCRKSR--------IRSSLIQEVLSLDPTGAGL 328
            A T+P +  TPV  +SP+CMGD+Y K+SC ++          R  L++E+ SL  +   L
Sbjct: 854  ATTSPANCKTPVNNASPVCMGDDYFKKSCNRNLSKSCLHKVFRKDLLKEMRSLSASRPEL 913

Query: 329  ISPTKDTRKRRDMSLICVLFSRHLDGDIVKQQKKILSRLGASESSSM 469
            I+P+KD+RKR+DMS + +L+SRHLD DI+K QKKIL+RLG S +SS+
Sbjct: 914  ITPSKDSRKRKDMSDVRILYSRHLDEDIIKHQKKILARLGVSVASSV 960


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