BLASTX nr result

ID: Atractylodes21_contig00050121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050121
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   129   2e-28
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   129   3e-28
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   120   9e-26
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   118   4e-25
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...   115   4e-24

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/101 (59%), Positives = 79/101 (78%)
 Frame = +2

Query: 2   TNPKTLKLRGKLGETEVIVMIDPGATHNFISLSVIEKLGITVTPTVEFGVCLGTGKAVQG 181
           ++PKTLK+ G +   +VIVM+DPGATHNFISL  + +L I ++ +  FGV LGTG    G
Sbjct: 415 SSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTGAEAHG 474

Query: 182 KGECQGLLLHLQGLEIRENFLPLTLGNSDLILGIQWLEKLG 304
           +GEC+ + LHLQG+ + E++LPLTLGNSDLILG+QWLEKLG
Sbjct: 475 QGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKLG 515


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   TNPKTLKLRGKLGETEVIVMIDPGATHNFISLSVIEKLGITVTPTVEFGVCLGTGKAVQG 181
           +NPKT+KL G +   EV+VMIDPGATHNF+SL  I+KLGI VT + EFGV LG G+AV+G
Sbjct: 478 SNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRG 537

Query: 182 KGECQGLLLHLQ-GLEIRENFLPLTLGNSDLILGIQWLEKLG 304
            G C+ + L+L  GL + E+FLPL LGNSD+ILG+QWLE LG
Sbjct: 538 TGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLG 579


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/101 (55%), Positives = 78/101 (77%)
 Frame = +2

Query: 2   TNPKTLKLRGKLGETEVIVMIDPGATHNFISLSVIEKLGITVTPTVEFGVCLGTGKAVQG 181
           T P T K++GK+ + EV+VMID GATHNFISL ++E++ I  T T ++GV +G+GKAVQG
Sbjct: 365 TAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGVIMGSGKAVQG 424

Query: 182 KGECQGLLLHLQGLEIRENFLPLTLGNSDLILGIQWLEKLG 304
           KG C G+++ L GL + E+FLPL LG+ D++LG+QWL K G
Sbjct: 425 KGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQG 465


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  118 bits (296), Expect = 4e-25
 Identities = 51/101 (50%), Positives = 78/101 (77%)
 Frame = +2

Query: 2    TNPKTLKLRGKLGETEVIVMIDPGATHNFISLSVIEKLGITVTPTVEFGVCLGTGKAVQG 181
            T P T+K++G +G  EVI+++D GATHNF+SL ++++L + +T T  +GV +GTG +V+G
Sbjct: 1054 TTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKG 1113

Query: 182  KGECQGLLLHLQGLEIRENFLPLTLGNSDLILGIQWLEKLG 304
            KG C+G+ + +QGL + E+FLPL LGN+D+ILG+ WL  LG
Sbjct: 1114 KGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLG 1154


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/101 (53%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   TNPKTLKLRGKLGETEVIVMIDPGATHNFISLSVIEKLGITVTPTVEFGVCLGTGKAVQG 181
           TNP T+K+RGK+ + EVI++ID GATHNFIS  V+++L +    T  +GV LG+G AV+G
Sbjct: 412 TNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKG 471

Query: 182 KGECQGLLLHLQGLEIRENFLPLTLGNSDLILGIQWLEKLG 304
           KG C+G+ L L+G ++  NFLPL LG  D +LG+QWL  LG
Sbjct: 472 KGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLG 512


Top