BLASTX nr result

ID: Atractylodes21_contig00050043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050043
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516227.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine ...    74   1e-11
emb|CBI29601.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi...    65   6e-09

>ref|XP_002516227.1| conserved hypothetical protein [Ricinus communis]
            gi|223544713|gb|EEF46229.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1233

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/96 (54%), Positives = 62/96 (64%), Gaps = 22/96 (22%)
 Frame = -3

Query: 222  NHTKIFSDFGDEETDDGNSE-------------------KSLLRSKRAR---KSLPEDTC 109
            NHTKIFSDFGDE+T D ++E                   K+ LRSKR R   KSLPED  
Sbjct: 997  NHTKIFSDFGDEDTQDDDAEYMDIKTVSGRQSKSSQLKSKASLRSKRIRKSDKSLPED-L 1055

Query: 108  DQEDDEPLDLFDHQKTRLSLRSSSEHLKKKLQSDDE 1
            DQ +DEPLDL D +KTR +LR +SEHLK+K +SDDE
Sbjct: 1056 DQIEDEPLDLLDQRKTRSALR-ASEHLKRKQESDDE 1090


>ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|222833495|gb|EEE71972.1|
            predicted protein [Populus trichocarpa]
          Length = 1029

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 17/91 (18%)
 Frame = -3

Query: 222  NHTKIFSDFGDEETDDGNSE--------------KSLLRSK---RARKSLPEDTCDQEDD 94
            NHTKIFSDF D ET++ + E               S L+ K   R+ KSLPED  DQ +D
Sbjct: 805  NHTKIFSDFSDGETENSDGEYMDTKTVSGRHSKFSSQLKPKASLRSDKSLPEDLFDQLED 864

Query: 93   EPLDLFDHQKTRLSLRSSSEHLKKKLQSDDE 1
            EPLDL D  KTR +LRS++ HLK+K +SDD+
Sbjct: 865  EPLDLLDRYKTRSALRSTA-HLKRKQESDDD 894


>ref|XP_003541316.1| PREDICTED: RRP12-like protein-like [Glycine max]
          Length = 1274

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 15/89 (16%)
 Frame = -3

Query: 222  NHTKIFSDFGDEETDDGNSE---------------KSLLRSKRARKSLPEDTCDQEDDEP 88
            NHTKIFSDF   + D GNS+               KS   S R +K+LPE   DQ DDEP
Sbjct: 1042 NHTKIFSDF---DGDSGNSDAEYMISRGSKASLHPKSAASSFRLKKNLPEHLSDQSDDEP 1098

Query: 87   LDLFDHQKTRLSLRSSSEHLKKKLQSDDE 1
            LDL D QKTR +L+  SEHLK+K + DDE
Sbjct: 1099 LDLLDRQKTRSALK-MSEHLKRKSRLDDE 1126


>emb|CBI29601.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/95 (47%), Positives = 53/95 (55%), Gaps = 21/95 (22%)
 Frame = -3

Query: 222  NHTKIFSDFGDEE--------TDDG-------------NSEKSLLRSKRARKSLPEDTCD 106
            NHTKIFS+FGD E        TDD              NS+ S  R  +A K LPED  D
Sbjct: 993  NHTKIFSNFGDGESEGSDAEYTDDQTLFGQQSKATLYYNSKASSSRMHKAAKRLPEDLFD 1052

Query: 105  QEDDEPLDLFDHQKTRLSLRSSSEHLKKKLQSDDE 1
            Q +DEPLDL D  KTR +LRS+  HLK+K   +DE
Sbjct: 1053 QLEDEPLDLLDQHKTRSALRSTG-HLKRKPGLEDE 1086


>ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1439

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 21/95 (22%)
 Frame = -3

Query: 222  NHTKIFSDFGDEE--------TDDG-------------NSEKSLLRSKRARKSLPEDTCD 106
            NHTKIFS+FGD E        TDD              NS+ S  RS  A++ LPED  D
Sbjct: 1203 NHTKIFSNFGDGESEGSDAEYTDDQTLFGQQSKATLYYNSKASSSRSVTAKR-LPEDLFD 1261

Query: 105  QEDDEPLDLFDHQKTRLSLRSSSEHLKKKLQSDDE 1
            Q +DEPLDL D  KTR +LRS+  HLK+K   +DE
Sbjct: 1262 QLEDEPLDLLDQHKTRSALRSTG-HLKRKPGLEDE 1295


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