BLASTX nr result

ID: Atractylodes21_contig00050042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050042
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   103   1e-20
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   100   1e-19
ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221...    98   8e-19
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    98   8e-19
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    96   2e-18

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/122 (38%), Positives = 74/122 (60%)
 Frame = -3

Query: 366  SKDPMFQRVKSDLEEKRAEHKGFTVTEDLLWYKGRLVLPRTSTLIRQILDEFHSSSLGGH 187
            S+D   Q++  DL+   +   G+ + + +L Y+GRLV+   S +I  +L EFHS+  GGH
Sbjct: 818  SRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFHSTPQGGH 877

Query: 186  SGIERTYQRVAAELFWWGMKADVKDYVRACDTCQRNKXXXXXXXXXXXXXXXXXQVWDEV 7
            SG  RTY+R+AA ++W GMK  V++YVR+CDTCQR K                 ++W+++
Sbjct: 878  SGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVPDRIWEDL 937

Query: 6    TM 1
            +M
Sbjct: 938  SM 939


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/122 (36%), Positives = 75/122 (61%)
 Frame = -3

Query: 366  SKDPMFQRVKSDLEEKRAEHKGFTVTEDLLWYKGRLVLPRTSTLIRQILDEFHSSSLGGH 187
            S+DP  ++++ +++  +A   GFT  + +L +KGRLV+PR   +  +++ E+H++ +GGH
Sbjct: 895  SQDPDIRKLREEVQSGKAPLAGFTEEQGVLKFKGRLVVPRKVAMTSRLIHEYHATPMGGH 954

Query: 186  SGIERTYQRVAAELFWWGMKADVKDYVRACDTCQRNKXXXXXXXXXXXXXXXXXQVWDEV 7
            SGI +TYQR+A E FW GMK DV  +++ C  CQ+NK                  +W++V
Sbjct: 955  SGIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDV 1014

Query: 6    TM 1
            +M
Sbjct: 1015 SM 1016


>ref|XP_004151679.1| PREDICTED: uncharacterized protein LOC101221655, partial [Cucumis
           sativus]
          Length = 562

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
 Frame = -3

Query: 366 SKDPMFQRVKSDLEEKRAE-HKGFTVTEDLLWYKGRLVLPRTSTLIRQILDEFHSSSLGG 190
           +KD   Q+++ +LEEK+ E +  ++V +D+L YKGRLV+ + S L   IL  +H S  GG
Sbjct: 249 NKDEKLQKIRRELEEKKEEPNSQYSVKQDMLMYKGRLVIAKASRLTPMILHTYHDSVFGG 308

Query: 189 HSG---IERTYQRVAAELFWWGMKADVKDYVRACDTCQRNKXXXXXXXXXXXXXXXXXQV 19
           HSG     RTY+R++ EL W GMK DVK Y   C  CQ+NK                 +V
Sbjct: 309 HSGFLRFLRTYKRISGELHWEGMKQDVKKYCEECLICQQNKTLALSPAGLLTPLEVPNRV 368

Query: 18  WDEVTM 1
           W++++M
Sbjct: 369 WEDISM 374


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/95 (49%), Positives = 60/95 (63%)
 Frame = -3

Query: 360  DPMFQRVKSDLEEKRAEHKGFTVTEDLLWYKGRLVLPRTSTLIRQILDEFHSSSLGGHSG 181
            D   + +  +L++   E   F      LWYK R+VL + STLI  +L  FH S LGGHSG
Sbjct: 1278 DEELKAIIEELKQNPDEPSKFQWVNGNLWYKKRIVLSKESTLIPTLLHTFHDSILGGHSG 1337

Query: 180  IERTYQRVAAELFWWGMKADVKDYVRACDTCQRNK 76
              RTY+R+  EL+W GMKADVK YV+ C+ CQRNK
Sbjct: 1338 FLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNK 1372


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/100 (44%), Positives = 64/100 (64%)
 Frame = -3

Query: 300  FTVTEDLLWYKGRLVLPRTSTLIRQILDEFHSSSLGGHSGIERTYQRVAAELFWWGMKAD 121
            +++ +  L+YKGRLVLP+TS+L+  IL  FH   +GGHSG  RTY+R+AAEL+W GMK D
Sbjct: 841  YSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSGQLRTYKRIAAELYWEGMKND 900

Query: 120  VKDYVRACDTCQRNKXXXXXXXXXXXXXXXXXQVWDEVTM 1
            +K YV  C  CQ+NK                 ++W++++M
Sbjct: 901  IKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISM 940


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