BLASTX nr result

ID: Atractylodes21_contig00048963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048963
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|2...   150   9e-35
gb|ABK93936.1| unknown [Populus trichocarpa]                          150   9e-35
ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus ...   144   7e-33
ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4...   136   2e-30
ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7...   134   9e-30

>ref|XP_002308701.1| predicted protein [Populus trichocarpa] gi|222854677|gb|EEE92224.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  150 bits (380), Expect = 9e-35
 Identities = 87/152 (57%), Positives = 101/152 (66%), Gaps = 11/152 (7%)
 Frame = -1

Query: 542 ATYILMVMAHKSHGDRQAMVEAGIXXXXXXXXXXXXXXAQKRSSRILEILRINKGKQVSK 363
           A+YILMVMAHK++GDRQAM+EAGI              AQKR+SRILE LR++KGKQVS 
Sbjct: 342 ASYILMVMAHKAYGDRQAMIEAGIVSSLLELTLLGSTLAQKRASRILECLRVDKGKQVSG 401

Query: 362 NYEGGVGATVSAPLYGSPDTEST-----------DXXXXXXXXNAVKHLVEQSLHSNMRR 216
           NY G +GA VSAP+YG+P + S                      AVK LV+QSL +NMRR
Sbjct: 402 NYGGNMGAAVSAPIYGTPSSSSNPNLVSKECLEETEDMMSEEKKAVKQLVQQSLQNNMRR 461

Query: 215 IVKRANLPQDFVSSEHLKSSVAPFSTSKSLPF 120
           IVKRANLPQDFV SEH K S+   STSKSLPF
Sbjct: 462 IVKRANLPQDFVPSEHFK-SLTSSSTSKSLPF 492


>gb|ABK93936.1| unknown [Populus trichocarpa]
          Length = 206

 Score =  150 bits (380), Expect = 9e-35
 Identities = 87/152 (57%), Positives = 101/152 (66%), Gaps = 11/152 (7%)
 Frame = -1

Query: 542 ATYILMVMAHKSHGDRQAMVEAGIXXXXXXXXXXXXXXAQKRSSRILEILRINKGKQVSK 363
           A+YILMVMAHK++GDRQAM+EAGI              AQKR+SRILE LR++KGKQVS 
Sbjct: 56  ASYILMVMAHKAYGDRQAMIEAGIVSSLLELTLLGSTLAQKRASRILECLRVDKGKQVSG 115

Query: 362 NYEGGVGATVSAPLYGSPDTEST-----------DXXXXXXXXNAVKHLVEQSLHSNMRR 216
           NY G +GA VSAP+YG+P + S                      AVK LV+QSL +NMRR
Sbjct: 116 NYGGNMGAAVSAPIYGTPSSSSNPNLVSKECLEETEDMMSEEKKAVKQLVQQSLQNNMRR 175

Query: 215 IVKRANLPQDFVSSEHLKSSVAPFSTSKSLPF 120
           IVKRANLPQDFV SEH K S+   STSKSLPF
Sbjct: 176 IVKRANLPQDFVPSEHFK-SLTSSSTSKSLPF 206


>ref|XP_002515439.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223545383|gb|EEF46888.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 510

 Score =  144 bits (364), Expect = 7e-33
 Identities = 84/152 (55%), Positives = 99/152 (65%), Gaps = 11/152 (7%)
 Frame = -1

Query: 542 ATYILMVMAHKSHGDRQAMVEAGIXXXXXXXXXXXXXXAQKRSSRILEILRINKGKQVSK 363
           A+YILMVMAHK++GDRQAM+EAGI              AQKR+SRILE LR++KGKQ+S 
Sbjct: 360 ASYILMVMAHKAYGDRQAMIEAGIVSALLELTLLGSTLAQKRASRILECLRVDKGKQISD 419

Query: 362 NYEGGVGATVSAPLYGSPDTESTD-----------XXXXXXXXNAVKHLVEQSLHSNMRR 216
           +Y G +GA VSAP+YGS  + +                      AVK LV+QSL +NM R
Sbjct: 420 HYGGNLGAAVSAPIYGSSSSSANPNGVSKEFLEEAEDTMSEEKKAVKQLVQQSLQTNMMR 479

Query: 215 IVKRANLPQDFVSSEHLKSSVAPFSTSKSLPF 120
           IVKRANLPQDFV SEH KS  A  STSKSLPF
Sbjct: 480 IVKRANLPQDFVPSEHFKSLTAS-STSKSLPF 510


>ref|XP_002285290.1| PREDICTED: U-box domain-containing protein 4-like [Vitis vinifera]
          Length = 497

 Score =  136 bits (342), Expect = 2e-30
 Identities = 81/153 (52%), Positives = 101/153 (66%), Gaps = 12/153 (7%)
 Frame = -1

Query: 542 ATYILMVMAHKSHGDRQAMVEAGIXXXXXXXXXXXXXXAQKRSSRILEILRINKGKQVSK 363
           A+YILMVMAHKS+GDRQAM++AGI              AQKR+SRILE LR++KGKQVS+
Sbjct: 346 ASYILMVMAHKSYGDRQAMIDAGIVSSLLELSLLGSTLAQKRASRILECLRVDKGKQVSE 405

Query: 362 NYEGGVGAT-VSAPLYGSPDTES-----------TDXXXXXXXXNAVKHLVEQSLHSNMR 219
           +Y G +G+  VSAP+ GS  + +            +         AVK LV+QSL +NMR
Sbjct: 406 SYGGSLGSVGVSAPICGSSSSSADPNLSSKEAFEEEEDMMSEEKKAVKQLVQQSLQNNMR 465

Query: 218 RIVKRANLPQDFVSSEHLKSSVAPFSTSKSLPF 120
           RIVKRANLPQDFV S+H K ++   STSKSLPF
Sbjct: 466 RIVKRANLPQDFVPSDHFK-ALTSSSTSKSLPF 497


>ref|XP_003550208.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 503

 Score =  134 bits (337), Expect = 9e-30
 Identities = 84/151 (55%), Positives = 99/151 (65%), Gaps = 10/151 (6%)
 Frame = -1

Query: 542 ATYILMVMAHKSHGDRQAMVEAGIXXXXXXXXXXXXXXAQKRSSRILEILRINKGKQVSK 363
           A+YILMVMAHKS+GD+QAM+EAGI              AQKR+SRILEILR++KGKQVS 
Sbjct: 356 ASYILMVMAHKSYGDKQAMIEAGIASSLLELSLLGSTLAQKRASRILEILRVDKGKQVSG 415

Query: 362 NYEGGVGATVSAPLYGS----PD------TESTDXXXXXXXXNAVKHLVEQSLHSNMRRI 213
           +Y  G+GA VSAP+ GS    PD          D         AVK LV+QSL +NMR+I
Sbjct: 416 SY--GLGAAVSAPICGSLSGKPDGGGGRECFEEDEEMMSEEKKAVKQLVQQSLQNNMRKI 473

Query: 212 VKRANLPQDFVSSEHLKSSVAPFSTSKSLPF 120
           VKRANLP D V S+H K S+   STSKSLPF
Sbjct: 474 VKRANLPHDIVPSDHFK-SLTLSSTSKSLPF 503


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