BLASTX nr result

ID: Atractylodes21_contig00048907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048907
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...   115   3e-24
emb|CAN66979.1| hypothetical protein VITISV_004452 [Vitis vinifera]   115   3e-24
ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]                  106   2e-21

>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
           gi|302142306|emb|CBI19509.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   PLGPPGSSCYSMYSPAVPSFEGGNVRSFVTESPLSTRVNADNNSLFQYQDGGEGKENFPS 181
           PLGPPG + YS+YSPA+P FEGGN  +F+  SP S  V A +        GG G    P 
Sbjct: 269 PLGPPGIAYYSLYSPAIPMFEGGNAGNFMAGSPFSAGVIAPDGLAIHC--GGRGGV-MPV 325

Query: 182 LTDPCIARSVSIHG-SELLSQSLVRITQDDKIGGLMDAATNISSDVSRRDVATQMSP 349
            T+PC+ RS S+HG SELL+QS +R ++D+K  G+ DAAT+IS  VSRRD+ATQMSP
Sbjct: 326 RTEPCMGRSASVHGCSELLNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSP 382


>emb|CAN66979.1| hypothetical protein VITISV_004452 [Vitis vinifera]
          Length = 556

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   PLGPPGSSCYSMYSPAVPSFEGGNVRSFVTESPLSTRVNADNNSLFQYQDGGEGKENFPS 181
           PLGPPG + YS+YSPA+P FEGGN  +F+  SP S  V A +        GG G    P 
Sbjct: 313 PLGPPGIAYYSLYSPAIPMFEGGNAGNFMAGSPFSAGVIAPDGLAIHC--GGRGGV-MPV 369

Query: 182 LTDPCIARSVSIHG-SELLSQSLVRITQDDKIGGLMDAATNISSDVSRRDVATQMSP 349
            T+PC+ RS S+HG SELL+QS +R ++D+K  G+ DAAT+IS  VSRRD+ATQMSP
Sbjct: 370 RTEPCMGRSASVHGCSELLNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSP 426


>ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|222844160|gb|EEE81707.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/117 (51%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   PLGPPGSSCYSMYSPAVPSFEGGNVRSFVTESPLSTRVNADNNSLFQYQDGGEGKENFPS 181
           PLGPPG + YS+YSPA+  F+G N+ +F+  SP S  V A +      +  G     FP 
Sbjct: 284 PLGPPGVAYYSLYSPAIQVFDGRNMGNFIAGSPFSASVIAADG--LAVKSNGSHGVAFPM 341

Query: 182 LTDPCIARSVSIHG-SELLSQSLVRITQDDKIGGLMDAATNISSDVSRRDVATQMSP 349
            T+PC+ARSVS+HG SE+L+QS +  +QD+K+ G+ DAAT+IS  VSRRD+ATQMSP
Sbjct: 342 RTEPCMARSVSVHGCSEMLAQSSLP-SQDEKLDGVKDAATDISRAVSRRDMATQMSP 397


>ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|222835259|gb|EEE73694.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  108 bits (269), Expect = 6e-22
 Identities = 60/117 (51%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   PLGPPGSSCYSMYSPAVPSFEGGNVRSFVTESPLSTRVNADNNSLFQYQDGGEGKENFPS 181
           PLGPPG + YS+YSP +  F+GGN  +FV  SP S  V A +      +  G    +FP 
Sbjct: 109 PLGPPGVAYYSLYSPGMQVFDGGNAGNFVAGSPFSAGVIAADG--LGIRSHGSHGVSFPM 166

Query: 182 LTDPCIARSVSIHG-SELLSQSLVRITQDDKIGGLMDAATNISSDVSRRDVATQMSP 349
            T+PC+ARSVS+HG SE+++QS +  +QD+K+ G+ DAAT+IS  VSRRD+ATQMSP
Sbjct: 167 RTEPCMARSVSVHGCSEMVAQSSLP-SQDEKLDGVKDAATDISRVVSRRDMATQMSP 222


>gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]
          Length = 565

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   PLGPPGSSCYSMYSPAVPSFEGGNVRSFVTESPLSTRVNADNNSLFQYQDGGEGKENFPS 181
           PLGPPG + YS+YSPAVP F+GGNV +F+  SP +  V A +       D G     FP 
Sbjct: 266 PLGPPGVAYYSLYSPAVPMFDGGNVGNFMVGSPFTAGVLAPDGLGINSGDHGGA---FPL 322

Query: 182 LTDPCIARSVSIHG-SELLSQSLVRITQDDKIGGLMDAATNISSDVSRRDVATQMSP 349
             +PC+ARS S+HG SE+L+Q  +  + D+KI G  DAAT+IS  +SRRD+ATQMSP
Sbjct: 323 RMEPCMARSASVHGCSEVLNQPSLP-SHDEKIDGSRDAATDISRTISRRDMATQMSP 378


Top