BLASTX nr result

ID: Atractylodes21_contig00048807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048807
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL...    89   7e-23
ref|XP_002522085.1| mads box protein, putative [Ricinus communis...    87   9e-23
ref|XP_003594574.1| Agamous-like MADS-box protein AGL11 [Medicag...    87   5e-21
ref|XP_002271109.1| PREDICTED: agamous-like MADS-box protein AGL...    89   5e-21
ref|XP_002323738.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-20

>ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
           sativus] gi|449484412|ref|XP_004156875.1| PREDICTED:
           agamous-like MADS-box protein AGL62-like [Cucumis
           sativus]
          Length = 228

 Score = 89.4 bits (220), Expect(2) = 7e-23
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +2

Query: 170 RNTKGHQKIEMIKITDESSLVVTFSKPRSGLFKKASELCTLCGVEMAIIVFSPTKKPFS 346
           R ++G QK+EM+K+ +ES+L VTFSK RSGLFKKASELCTLCG E+AIIVFSP KK FS
Sbjct: 2   RKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60



 Score = 42.7 bits (99), Expect(2) = 7e-23
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 336 SHSHPTIEVIVDHFLEHNPPSSSSTSQFVDDYRNAN 443
           S  HP +E +++ F+  NPP SS T Q ++ +RNAN
Sbjct: 60  SFGHPCVEALIERFVTRNPPPSSGTLQLIEAHRNAN 95


>ref|XP_002522085.1| mads box protein, putative [Ricinus communis]
           gi|223538684|gb|EEF40285.1| mads box protein, putative
           [Ricinus communis]
          Length = 217

 Score = 87.0 bits (214), Expect(2) = 9e-23
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = +2

Query: 164 MPRNTKGHQKIEMIKITDESSLVVTFSKPRSGLFKKASELCTLCGVEMAIIVFSPTKKPF 343
           M + +KG QKI+M+K+ +ES+L VTFSK RSGLFKKASEL TLCG E+AIIVFSP KK F
Sbjct: 1   MAKRSKGRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVF 60

Query: 344 SSNY*G 361
           S  + G
Sbjct: 61  SFGHPG 66



 Score = 44.7 bits (104), Expect(2) = 9e-23
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = +3

Query: 336 SHSHPTIEVIVDHFLEHNPPSSSSTSQFVDDYRNAN 443
           S  HP +EV++D FL  NPP +S T Q ++ +RNA+
Sbjct: 61  SFGHPGVEVVIDRFLSRNPPQNSPTMQLIEAHRNAS 96


>ref|XP_003594574.1| Agamous-like MADS-box protein AGL11 [Medicago truncatula]
           gi|355483622|gb|AES64825.1| Agamous-like MADS-box
           protein AGL11 [Medicago truncatula]
          Length = 237

 Score = 87.0 bits (214), Expect(2) = 5e-21
 Identities = 42/59 (71%), Positives = 51/59 (86%)
 Frame = +2

Query: 170 RNTKGHQKIEMIKITDESSLVVTFSKPRSGLFKKASELCTLCGVEMAIIVFSPTKKPFS 346
           R ++G QKIEM KIT+ES+L VTFSK RSGLFKKASELCTLCG ++A++VFSP +K FS
Sbjct: 5   RKSQGRQKIEMKKITNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPREKVFS 63



 Score = 38.9 bits (89), Expect(2) = 5e-21
 Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
 Frame = +3

Query: 321 SPQQR--SHSHPTIEVIVDHFLEHNPPSSSSTSQFVDDYRNAN 443
           SP+++  S  HP ++ ++D +L   PP ++ T QF++ +R+A+
Sbjct: 56  SPREKVFSFGHPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSAS 98


>ref|XP_002271109.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
           gi|297736393|emb|CBI25116.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score = 89.4 bits (220), Expect(2) = 5e-21
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +2

Query: 170 RNTKGHQKIEMIKITDESSLVVTFSKPRSGLFKKASELCTLCGVEMAIIVFSPTKKPFS 346
           R +KG Q++EM K+T ES+L VTFSK RSGLFKKASELCTLCGVE+AI+VFSP KK +S
Sbjct: 5   RKSKGRQRVEMAKMTKESNLQVTFSKRRSGLFKKASELCTLCGVEIAIVVFSPGKKVYS 63



 Score = 36.6 bits (83), Expect(2) = 5e-21
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 336 SHSHPTIEVIVDHFLEHNPPSSSSTSQFVDDYRNAN 443
           S  HP +E I+D FL  NP  +SS  Q  + +R+AN
Sbjct: 63  SFGHPCVESIIDRFLTRNPLPNSSALQLFEAHRSAN 98


>ref|XP_002323738.1| predicted protein [Populus trichocarpa] gi|222866740|gb|EEF03871.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 92.4 bits (228), Expect(2) = 2e-20
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = +2

Query: 164 MPRNTKGHQKIEMIKITDESSLVVTFSKPRSGLFKKASELCTLCGVEMAIIVFSPTKKPF 343
           M R +KG QK+EM+KI +ES+L+VTFSK RSGLFKKASELCTLCG E++IIVFSP KK F
Sbjct: 1   MVRKSKGRQKLEMVKIPNESNLMVTFSKRRSGLFKKASELCTLCGAEVSIIVFSPGKKVF 60

Query: 344 S 346
           S
Sbjct: 61  S 61



 Score = 31.2 bits (69), Expect(2) = 2e-20
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 336 SHSHPTIEVIVDHFLEHNPPSSSSTSQFVDDYRNA 440
           S  HP++E +++ +L  N P +S     ++ +RNA
Sbjct: 61  SFGHPSVEKVMERYLSGNIPQTSGAFHLIEAHRNA 95


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