BLASTX nr result

ID: Atractylodes21_contig00048722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048722
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            80   2e-13
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    79   3e-13
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]    77   1e-12
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    77   1e-12
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          77   1e-12

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/71 (60%), Positives = 49/71 (69%)
 Frame = -1

Query: 219  MYVMVYTLPDLAHSVGVVSRFISNPGQPHCGPVKFILRYLNGTMSHGLIFGNNDNCDLVG 40
            MY MV T PD+AH+VGVVSRF+SNPG+ H   VK+ILRYL GT    L FG  DN  LVG
Sbjct: 1120 MYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFG-EDNPVLVG 1178

Query: 39   FCDFDYARDRD 7
            + D D A D D
Sbjct: 1179 YTDADMAGDVD 1189


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/71 (54%), Positives = 46/71 (64%)
 Frame = -1

Query: 219  MYVMVYTLPDLAHSVGVVSRFISNPGQPHCGPVKFILRYLNGTMSHGLIFGNNDNCDLVG 40
            MY MV T PDLAH+V VVSRF+  PG+ H   VK I RYL GT   GLI+G +  C + G
Sbjct: 1100 MYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTG 1159

Query: 39   FCDFDYARDRD 7
            + D DYA D D
Sbjct: 1160 YSDSDYAGDVD 1170


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/68 (45%), Positives = 50/68 (73%)
 Frame = -1

Query: 210 MVYTLPDLAHSVGVVSRFISNPGQPHCGPVKFILRYLNGTMSHGLIFGNNDNCDLVGFCD 31
           +  T PD++++VGV+SR++ NP +PH   V+ ILR++ GT+ +GL++   ++C LVG+CD
Sbjct: 756 LTLTRPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDCKLVGYCD 815

Query: 30  FDYARDRD 7
            DYA D D
Sbjct: 816 ADYAGDHD 823


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 31/68 (45%), Positives = 50/68 (73%)
 Frame = -1

Query: 210  MVYTLPDLAHSVGVVSRFISNPGQPHCGPVKFILRYLNGTMSHGLIFGNNDNCDLVGFCD 31
            +  T PD++++VGV+SR++ NP +PH   V+ ILR++ GT+ +GL++   ++C LVG+CD
Sbjct: 1083 LTLTXPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCD 1142

Query: 30   FDYARDRD 7
             DYA D D
Sbjct: 1143 ADYAGDHD 1150


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/71 (57%), Positives = 47/71 (66%)
 Frame = -1

Query: 219  MYVMVYTLPDLAHSVGVVSRFISNPGQPHCGPVKFILRYLNGTMSHGLIFGNNDNCDLVG 40
            MY MV T PD+AH+VGVVSRF+SNPG+ H   VK+ILRYL GT S  L FG      L G
Sbjct: 1117 MYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPI-LTG 1175

Query: 39   FCDFDYARDRD 7
            + D D A D D
Sbjct: 1176 YTDSDMAGDID 1186


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