BLASTX nr result

ID: Atractylodes21_contig00048655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048655
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              178   4e-43
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   172   3e-41
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  178 bits (452), Expect = 4e-43
 Identities = 80/117 (68%), Positives = 99/117 (84%)
 Frame = +1

Query: 1   VTYNILFNALCKHGRVSHAIDLLNCMLDRGCDPDLVTCTIFLKTLKEQINVSQDGSEFLE 180
           VTYNIL  ALCK   +SHAIDLLN MLDRGC+PDL+TC IFL  L+E++N  QDG EFL+
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 584

Query: 181 ELVLRLHKRKRVVGASKIIEVMLQKYLTPKTSTWEIVIQEVCKPKKIRAAIDRCWNN 351
           ELV+RLHKR+R+VGA+KIIEVMLQK+L P  STWE +I E+CKPKK++A ID+CW++
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSS 641


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  178 bits (452), Expect = 4e-43
 Identities = 80/117 (68%), Positives = 99/117 (84%)
 Frame = +1

Query: 1   VTYNILFNALCKHGRVSHAIDLLNCMLDRGCDPDLVTCTIFLKTLKEQINVSQDGSEFLE 180
           VTYNIL  ALCK   +SHAIDLLN MLDRGC+PDL+TC IFL  L+E++N  QDG EFL+
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 600

Query: 181 ELVLRLHKRKRVVGASKIIEVMLQKYLTPKTSTWEIVIQEVCKPKKIRAAIDRCWNN 351
           ELV+RLHKR+R+VGA+KIIEVMLQK+L P  STWE +I E+CKPKK++A ID+CW++
Sbjct: 601 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSS 657


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  172 bits (435), Expect = 3e-41
 Identities = 77/116 (66%), Positives = 100/116 (86%)
 Frame = +1

Query: 1   VTYNILFNALCKHGRVSHAIDLLNCMLDRGCDPDLVTCTIFLKTLKEQINVSQDGSEFLE 180
           +TYNILFNALCK   +S A+DLLN MLDRGCDPDLVTC IFL+ L+E+++  QDG++FL+
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLD 593

Query: 181 ELVLRLHKRKRVVGASKIIEVMLQKYLTPKTSTWEIVIQEVCKPKKIRAAIDRCWN 348
           ELV+RL KR+R +GASKI+EVMLQK+L+PK STW  V+ E+C+PKKI+A ID+CW+
Sbjct: 594 ELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWS 649


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/116 (67%), Positives = 96/116 (82%)
 Frame = +1

Query: 1   VTYNILFNALCKHGRVSHAIDLLNCMLDRGCDPDLVTCTIFLKTLKEQINVSQDGSEFLE 180
           VTYNIL N LCK   +S AIDLLN MLDRGCDPDLVTCTIFL+ L+E+++  QDG EFL+
Sbjct: 552 VTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLD 611

Query: 181 ELVLRLHKRKRVVGASKIIEVMLQKYLTPKTSTWEIVIQEVCKPKKIRAAIDRCWN 348
           ELV+RL KR+RV+GASKI+EVMLQK L PK STW  V++ +CKPKK++A I +CW+
Sbjct: 612 ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWS 667


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/116 (67%), Positives = 97/116 (83%)
 Frame = +1

Query: 1   VTYNILFNALCKHGRVSHAIDLLNCMLDRGCDPDLVTCTIFLKTLKEQINVSQDGSEFLE 180
           VTYNIL NALCK   +S AIDLLN MLDRGCDPDLVTC IFL+TL+E+++  QDG EFL+
Sbjct: 522 VTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLD 581

Query: 181 ELVLRLHKRKRVVGASKIIEVMLQKYLTPKTSTWEIVIQEVCKPKKIRAAIDRCWN 348
            LV+RL KR+RV+GASKI+EVMLQK L PK STW  V++++C PKK++AAI +CW+
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWS 637


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