BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048653
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    60   7e-18
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    60   1e-16
gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsi...    57   6e-16
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    58   1e-15
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    61   1e-15

>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 59.7 bits (143), Expect(2) = 7e-18
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -1

Query: 381 QDLITRKMIGTVDKDQGLYLLKVGDYGSQVAVN-LVSMETWHKRFGHPSPEVLDSLKDVL 205
           QDLI  +M+G   +   LYLL VGD    ++VN +V +  WH+R GH S + LD++ D L
Sbjct: 520 QDLIKGRMLGQGRRVANLYLLDVGD--QSISVNAVVDISMWHRRLGHASLQRLDAISDSL 577

Query: 204 SFDKSSRLDDNNPCLICPLAKQRRLPF 124
              +      ++ C +C LAKQR+L F
Sbjct: 578 GTTRHKN-KGSDFCHVCHLAKQRKLSF 603



 Score = 55.5 bits (132), Expect(2) = 7e-18
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -2

Query: 113 NNFCNETFGLVHCDVWGPFHKPNYQGYRFFLTVVDDH 3
           N  C E F L+H DVWGPF     +GY++FLT+VDDH
Sbjct: 607 NKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDH 643


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 60.5 bits (145), Expect(2) = 1e-16
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 113 NNFCNETFGLVHCDVWGPFHKPNYQGYRFFLTVVDDH 3
           NN CN TF L+H DVWGPF     +GY++FLT+VDDH
Sbjct: 618 NNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDH 654



 Score = 50.4 bits (119), Expect(2) = 1e-16
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = -1

Query: 381 QDLITRKMIGTVDKDQGLYLLKVGDYGSQVAVN-LVSMETWHKRFGHPSPEVLDSLKDVL 205
           QDL     +G   +   LY+L        ++VN +V +  WHKR GHPS   LDSL +VL
Sbjct: 531 QDLTKGLTLGEGKRIGNLYVLDT--QSPAISVNAVVDVSVWHKRLGHPSFSRLDSLSEVL 588

Query: 204 SFDKSSRLDDNNPCLICPLAKQRRLPFVS 118
              +      +  C +C LAKQ++L F S
Sbjct: 589 GTTRHKN-KKSAYCHVCHLAKQKKLSFPS 616


>gb|AAD41979.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 57.4 bits (137), Expect(2) = 6e-16
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = -2

Query: 113 NNFCNETFGLVHCDVWGPFHKPNYQGYRFFLTVVDDH 3
           NN CNE F ++H D+WGPF      GY++FLT+VDDH
Sbjct: 466 NNVCNEIFEMLHIDIWGPFSVETVDGYQYFLTIVDDH 502



 Score = 51.2 bits (121), Expect(2) = 6e-16
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -1

Query: 381 QDLITRKMIGTVDKDQGLYLLKVGDYGSQVAVN-LVSMETWHKRFGHPSPEVLDSLKDVL 205
           QDLI  +M+G   +   LY++ V D  + V+VN +V + TWH R  H S + LD + + L
Sbjct: 379 QDLIKGRMLGHGRRVANLYVMDVED--TNVSVNAVVDISTWHNRLRHASLQRLDVISESL 436

Query: 204 SFDKSSRLDDNNPCLICPLAKQRRLPFVS 118
              K      ++ C +C LAK R+L F S
Sbjct: 437 GTTKHKN-KGSDYCHVCHLAKHRKLSFPS 464


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 57.8 bits (138), Expect(2) = 1e-15
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -1

Query: 381 QDLITRKMIGTVDKDQGLYLLKV------GDYGSQVAVNLVSMETWHKRFGHPSPEVLDS 220
           QD     M+G   +   LY++ +      G   S    ++ S + WHKR GHPS + L  
Sbjct: 362 QDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQKLQP 421

Query: 219 LKDVLSFDKSSRLDDNNPCLICPLAKQRRLPFVS 118
           +  +LSF K     D + C +C ++KQ+ LPFVS
Sbjct: 422 MSSLLSFPKQKNNTDFH-CRVCHISKQKHLPFVS 454



 Score = 50.1 bits (118), Expect(2) = 1e-15
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -2

Query: 113 NNFCNETFGLVHCDVWGPFHKPNYQGYRFFLTVVDDH 3
           NN  +  F L+H D WGPF    + GYR+FLT+VDD+
Sbjct: 456 NNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDY 492


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 60.8 bits (146), Expect(2) = 1e-15
 Identities = 35/86 (40%), Positives = 47/86 (54%)
 Frame = -1

Query: 381 QDLITRKMIGTVDKDQGLYLLKVGDYGSQVAVNLVSMETWHKRFGHPSPEVLDSLKDVLS 202
           QDL + KMIG   + +GLY L +   G+   VN  + + WH+R GHPS +V      VL 
Sbjct: 494 QDLQSGKMIGMGTESEGLYCLNLPRKGTCNVVNTKTQDLWHQRLGHPSSKV-----SVLF 548

Query: 201 FDKSSRLDDNNPCLICPLAKQRRLPF 124
               ++  D + C ICPLAK  R PF
Sbjct: 549 PFLQNKTLDVSTCSICPLAKHTRTPF 574



 Score = 46.6 bits (109), Expect(2) = 1e-15
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -2

Query: 92  FGLVHCDVWGPFHKPNYQGYRFFLTVVDDH 3
           F L+H D+WG +H P+  G ++FLT+VDDH
Sbjct: 585 FDLIHVDIWGGYHVPSLSGAQYFLTIVDDH 614