BLASTX nr result

ID: Atractylodes21_contig00048639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048639
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   190   9e-47
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...   190   9e-47
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   188   4e-46
emb|CBI20738.3| unnamed protein product [Vitis vinifera]              188   4e-46
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   186   2e-45

>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%)
 Frame = +2

Query: 5    YLQTMTKDYGIEPEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQ 184
            Y   M K YGI PEIEHYSCLVDALGRAGR++EAE +IAS+P +A+ SMYR LLGACR +
Sbjct: 1323 YFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTK 1382

Query: 185  GDMKTGKRAATKLLKLEPFESSTYVLVSNVYAASKQWSEVADXXXXXXXXXXXXEAGFSW 364
            GD +T KR A KLL L+P +SS YVL+SN+YAAS+QW +V D            + GFSW
Sbjct: 1383 GDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSW 1442

Query: 365  IDVKNKGHVFVVDDRSHPEREIIY 436
            IDVKNK H+FVVDDRSHP+  +IY
Sbjct: 1443 IDVKNKVHLFVVDDRSHPQASLIY 1466


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%)
 Frame = +2

Query: 5    YLQTMTKDYGIEPEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQ 184
            Y   M K YGI PEIEHYSCLVDALGRAGR++EAE +IAS+P +A+ SMYR LLGACR +
Sbjct: 1323 YFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTK 1382

Query: 185  GDMKTGKRAATKLLKLEPFESSTYVLVSNVYAASKQWSEVADXXXXXXXXXXXXEAGFSW 364
            GD +T KR A KLL L+P +SS YVL+SN+YAAS+QW +V D            + GFSW
Sbjct: 1383 GDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSW 1442

Query: 365  IDVKNKGHVFVVDDRSHPEREIIY 436
            IDVKNK H+FVVDDRSHP+  +IY
Sbjct: 1443 IDVKNKVHLFVVDDRSHPQASLIY 1466


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  188 bits (477), Expect = 4e-46
 Identities = 87/144 (60%), Positives = 111/144 (77%)
 Frame = +2

Query: 5    YLQTMTKDYGIEPEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQ 184
            YL +M  DYGIEPEIEHYSCLVDALGRAG V+EA+K+I ++P +A+ S+ R LLGACR+Q
Sbjct: 1331 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 1390

Query: 185  GDMKTGKRAATKLLKLEPFESSTYVLVSNVYAASKQWSEVADXXXXXXXXXXXXEAGFSW 364
            GD++TGKR A +L  LEPF+S+ YVL+SN+YAA+ +W +V D            + GFSW
Sbjct: 1391 GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 1450

Query: 365  IDVKNKGHVFVVDDRSHPEREIIY 436
            IDVKN  H+FVVDDRSHP+ +IIY
Sbjct: 1451 IDVKNMLHLFVVDDRSHPQADIIY 1474


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  188 bits (477), Expect = 4e-46
 Identities = 87/144 (60%), Positives = 111/144 (77%)
 Frame = +2

Query: 5    YLQTMTKDYGIEPEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQ 184
            YL +M  DYGIEPEIEHYSCLVDALGRAG V+EA+K+I ++P +A+ S+ R LLGACR+Q
Sbjct: 616  YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 675

Query: 185  GDMKTGKRAATKLLKLEPFESSTYVLVSNVYAASKQWSEVADXXXXXXXXXXXXEAGFSW 364
            GD++TGKR A +L  LEPF+S+ YVL+SN+YAA+ +W +V D            + GFSW
Sbjct: 676  GDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 735

Query: 365  IDVKNKGHVFVVDDRSHPEREIIY 436
            IDVKN  H+FVVDDRSHP+ +IIY
Sbjct: 736  IDVKNMLHLFVVDDRSHPQADIIY 759


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/144 (61%), Positives = 113/144 (78%)
 Frame = +2

Query: 5    YLQTMTKDYGIEPEIEHYSCLVDALGRAGRVEEAEKLIASIPLEATGSMYRTLLGACRLQ 184
            Y+++M +DYGI+PEIEHYSCL DALGRAG V+EAE LI S+ +EA+ SMYRTLL ACR+Q
Sbjct: 748  YIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQ 807

Query: 185  GDMKTGKRAATKLLKLEPFESSTYVLVSNVYAASKQWSEVADXXXXXXXXXXXXEAGFSW 364
            GD +TGKR ATKLL+LEP +SS YVL+SN+YAA+ +W E+              + GFSW
Sbjct: 808  GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 867

Query: 365  IDVKNKGHVFVVDDRSHPEREIIY 436
            I+VKNK H+FVVDDRS+P+ E+IY
Sbjct: 868  IEVKNKIHLFVVDDRSNPQTELIY 891


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