BLASTX nr result

ID: Atractylodes21_contig00048635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048635
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                78   9e-13
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    72   5e-11
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       71   8e-11
emb|CCH50954.1| T1.2 [Malus x robusta]                                 68   9e-10
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          66   3e-09

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   PGRSTIQTIHLLRRLMEKYHYRSKDLHMVFIELEKAYDGMPRELIWWFPEDRGC 162
           PGRST++ I+LLRRLME+Y    KDLHMVFI+LEKAYD +PR+++W   E +GC
Sbjct: 673 PGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVPRDILWRILEKKGC 726


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/53 (62%), Positives = 42/53 (79%)
 Frame = +1

Query: 1   PGRSTIQTIHLLRRLMEKYHYRSKDLHMVFIELEKAYDGMPRELIWWFPEDRG 159
           PGRST++ I+LLRRLME+Y    KDLHMVFI+LEKAYD + R++IW   E +G
Sbjct: 277 PGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEKKG 329


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/53 (56%), Positives = 43/53 (81%)
 Frame = +1

Query: 1   PGRSTIQTIHLLRRLMEKYHYRSKDLHMVFIELEKAYDGMPRELIWWFPEDRG 159
           PGRST++ I+LLRR+ME+Y    +DLH++FI+LEKAYD +PRE++W   E +G
Sbjct: 2   PGRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKG 54


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = +1

Query: 1   PGRSTIQTIHLLRRLMEKYHYRSKDLHMVFIELEKAYDGMPRELIWWFPEDRG 159
           PG ST++ I+LLR+LMEKY     DLHMVFI+LEK YD +PR+++W   E +G
Sbjct: 296 PGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDILWRILEKKG 348


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = +1

Query: 4   GRSTIQTIHLLRRLMEKYHYRSKDLHMVFIELEKAYDGMPRELIW 138
           GRS  + I+LLRR+ME+Y    +DLHMVFI+LEKAYD +PRE++W
Sbjct: 168 GRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLW 212


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