BLASTX nr result

ID: Atractylodes21_contig00048621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048621
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   103   2e-20
gb|AAF71196.1| pol protein integrase region [Pinus brutia]             94   9e-18
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    92   4e-17
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]    92   6e-17
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    91   7e-17

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  103 bits (256), Expect = 2e-20
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = -2

Query: 182  PHDPISDRDPLFLSQFWQEIFRFQGTELHMSLAYHPESDGQTEVVNRCLETYLRCFAADQ 3
            P   +SDRDP+F+S FW+E+F+ QGT+L MS+AYHPE+DGQTEVVNRCLETYLRCF ADQ
Sbjct: 994  PLSIVSDRDPIFMSNFWKELFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLRCFIADQ 1053


>gb|AAF71196.1| pol protein integrase region [Pinus brutia]
          Length = 131

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 38/60 (63%), Positives = 50/60 (83%)
 Frame = -2

Query: 182 PHDPISDRDPLFLSQFWQEIFRFQGTELHMSLAYHPESDGQTEVVNRCLETYLRCFAADQ 3
           P   +SDRDP+F S FWQE+FR QGT+L +S +YHP++DGQTE VN+CLETYLRCF +++
Sbjct: 60  PTSIVSDRDPIFTSNFWQELFRIQGTQLKLSTSYHPQTDGQTEAVNKCLETYLRCFTSEK 119


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = -2

Query: 182  PHDPISDRDPLFLSQFWQEIFRFQGTELHMSLAYHPESDGQTEVVNRCLETYLRCFA 12
            P   ISDRDP+F+SQFWQE+F+  GT+L MS +YHP++DGQ+EVVNRC+E YLRC+A
Sbjct: 1067 PKSIISDRDPVFMSQFWQELFKLSGTQLKMSSSYHPQTDGQSEVVNRCVEQYLRCYA 1123


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/59 (64%), Positives = 45/59 (76%)
 Frame = -2

Query: 182  PHDPISDRDPLFLSQFWQEIFRFQGTELHMSLAYHPESDGQTEVVNRCLETYLRCFAAD 6
            PH    DRDP+F + FWQE F+ QG  L +S AYHP++DGQTEVVNRC+ETYLRC A D
Sbjct: 1120 PHSITCDRDPIFTNVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGD 1178


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = -2

Query: 182  PHDPISDRDPLFLSQFWQEIFRFQGTELHMSLAYHPESDGQTEVVNRCLETYLRCFAAD 6
            PH    DRDP+F S FWQE F+ QG  L +S AYHP++DGQTEVVNRC+ETYLRC   D
Sbjct: 1151 PHSITCDRDPIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMVGD 1209


Top