BLASTX nr result

ID: Atractylodes21_contig00048615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048615
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   269   5e-70
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   262   6e-68
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   253   3e-65
ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...   234   2e-59
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   225   1e-56

>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  269 bits (688), Expect = 5e-70
 Identities = 128/173 (73%), Positives = 150/173 (86%)
 Frame = +3

Query: 3   NHLFRIMLFKGFKPDVVTYNCLIDGCCKTYRIERALELFDDMVRQGCFPNRVTYNSFIRY 182
           NHLFRIMLFKGF PDVVTYNCLIDGCCKTYRIERALELFDDM ++GC PNRVTYNSFIRY
Sbjct: 260 NHLFRIMLFKGFVPDVVTYNCLIDGCCKTYRIERALELFDDMNKRGCVPNRVTYNSFIRY 319

Query: 183 YCATNEIDKAMEMLQRMQELNHGLPTTSSYTPIIHAFCEAGKALEAWDILVELVDRGSIP 362
           Y A NEIDKA++ML +M+E+NHG+PTTSSYTPIIHA CE G+ LEA D L+ELVD GS+P
Sbjct: 320 YSAVNEIDKAVDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVP 379

Query: 363 REYTYRLVHGMLKSAGKADLLDDELCEKIEDGIRNRYKQVMKVKPVMSAKPQL 521
           REYTY++V   L+SAG+A++L DEL  +IE+GI NRYKQVMKVK +M+ +  L
Sbjct: 380 REYTYKVVCDSLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTHRISL 432


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  262 bits (670), Expect = 6e-68
 Identities = 126/170 (74%), Positives = 144/170 (84%)
 Frame = +3

Query: 3   NHLFRIMLFKGFKPDVVTYNCLIDGCCKTYRIERALELFDDMVRQGCFPNRVTYNSFIRY 182
           NHLFRIMLFKGF PDVVTYNCLIDGCCKTYRIERALELF+DM R+GC PNRVTYNSFIRY
Sbjct: 269 NHLFRIMLFKGFAPDVVTYNCLIDGCCKTYRIERALELFEDMNRRGCVPNRVTYNSFIRY 328

Query: 183 YCATNEIDKAMEMLQRMQELNHGLPTTSSYTPIIHAFCEAGKALEAWDILVELVDRGSIP 362
           Y A NEIDKA+EML+RMQ +NHGL T+SSYTPIIHA CEA + LEA D L+ELVD GSIP
Sbjct: 329 YSAVNEIDKAVEMLRRMQNMNHGLATSSSYTPIIHALCEADRVLEARDFLLELVDGGSIP 388

Query: 363 REYTYRLVHGMLKSAGKADLLDDELCEKIEDGIRNRYKQVMKVKPVMSAK 512
           REYTY+LV   +KSA + +L+DDE   +I+DGI  R++QV KVKP+M  K
Sbjct: 389 REYTYKLVCETMKSAREVNLIDDEFHNRIKDGIDERFRQVKKVKPIMVRK 438


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  253 bits (647), Expect = 3e-65
 Identities = 118/170 (69%), Positives = 144/170 (84%)
 Frame = +3

Query: 3   NHLFRIMLFKGFKPDVVTYNCLIDGCCKTYRIERALELFDDMVRQGCFPNRVTYNSFIRY 182
           NHLFRIMLFKGF PDVVTYN LIDGCCKTYRI+RALELF+DM ++GC PNR+TYNSFIRY
Sbjct: 274 NHLFRIMLFKGFSPDVVTYNSLIDGCCKTYRIQRALELFEDMSKRGCTPNRLTYNSFIRY 333

Query: 183 YCATNEIDKAMEMLQRMQELNHGLPTTSSYTPIIHAFCEAGKALEAWDILVELVDRGSIP 362
           Y A NEID+A++ML+ MQ++NHG+ T+SSYTPIIHA CE GK +EA D L+EL++ GS+P
Sbjct: 334 YSAVNEIDQAIKMLRMMQKMNHGIATSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVP 393

Query: 363 REYTYRLVHGMLKSAGKADLLDDELCEKIEDGIRNRYKQVMKVKPVMSAK 512
           REYTY+LV  +L SAGKA LLD+ + E+I  GI NRY++V KVK +MS K
Sbjct: 394 REYTYQLVCNLLNSAGKASLLDENVHERIRHGIENRYREVKKVKLIMSRK 443


>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like
            [Glycine max]
          Length = 732

 Score =  234 bits (596), Expect = 2e-59
 Identities = 113/170 (66%), Positives = 136/170 (80%), Gaps = 2/170 (1%)
 Frame = +3

Query: 9    LFRIMLFKGFKPDVVTYNCLIDGCCKTYRIERALELFDDMVRQGCFPNRVTYNSFIRYYC 188
            LFR+MLF+   PDVVTYN LIDGCCKT R+ERALELFDDM R+G  PNRVTY  FIRYYC
Sbjct: 554  LFRLMLFRKLVPDVVTYNALIDGCCKTLRVERALELFDDMKRRGLVPNRVTYGCFIRYYC 613

Query: 189  ATNEIDKAMEMLQRMQELNHGLPTTSSYTPIIHAFCEAGKALEAWDILVELVDRGSIPRE 368
              NEIDK +EML+ MQ L HG+P +SSYTPIIHA CEAG+ +EAW  LVELV+ GS+PRE
Sbjct: 614  VVNEIDKGVEMLREMQRLGHGVPGSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPRE 673

Query: 369  YTYRLVHGMLKSAGKADLLDDE--LCEKIEDGIRNRYKQVMKVKPVMSAK 512
            YTY LV   L++AG+  LL+D   + ++I+DGI NRY+Q+MKVKPVM+ K
Sbjct: 674  YTYGLVCDRLRAAGEGGLLEDHDGVHKRIKDGIWNRYRQMMKVKPVMARK 723


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  225 bits (573), Expect = 1e-56
 Identities = 105/177 (59%), Positives = 138/177 (77%)
 Frame = +3

Query: 3   NHLFRIMLFKGFKPDVVTYNCLIDGCCKTYRIERALELFDDMVRQGCFPNRVTYNSFIRY 182
           N +FR MLF+GF PDVVTYNCLIDGCCKT RI RALELF+DM  +GC PN+VTYNSFIRY
Sbjct: 268 NRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327

Query: 183 YCATNEIDKAMEMLQRMQELNHGLPTTSSYTPIIHAFCEAGKALEAWDILVELVDRGSIP 362
           Y  TNEI+ A+EM++ M+++ HG+P +S+YTP+IHA  E  +A EA D+LVE+V+ G +P
Sbjct: 328 YSVTNEIEGAIEMMRTMKKMGHGVPGSSTYTPLIHALVETRRAAEARDLLVEMVEAGLVP 387

Query: 363 REYTYRLVHGMLKSAGKADLLDDELCEKIEDGIRNRYKQVMKVKPVMSAKPQLTMGD 533
           REYTY+LV   L S G A  LD+EL +++ +GI+ RY++VMK+KPVM+ K  +   D
Sbjct: 388 REYTYKLVWDALSSEGMAGTLDEELHKRMREGIQQRYRRVMKIKPVMARKDVVQKSD 444


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