BLASTX nr result

ID: Atractylodes21_contig00048613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048613
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172502.1| PREDICTED: uncharacterized mitochondrial pro...    81   1e-13
gb|ABE88099.1| conserved hypothetical protein [Medicago truncatula]    72   6e-11
gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold,...    65   4e-09
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...    64   1e-08
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    64   2e-08

>ref|XP_004172502.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like,
           partial [Cucumis sativus]
          Length = 296

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
 Frame = +2

Query: 47  SDMGTPQLSPTVL*CDNKSAIHITQ-----ECIKHIEIDCYFVCQHMVAKTVHLLPISTT 211
           +DMG PQ S T L CDN+SAI I       E  KHIE DC+FVC H+ + T+HL  IST 
Sbjct: 206 TDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHFVCHHLQSNTLHLQSISTI 265

Query: 212 EQPADVFTKTDLPSHFQFMVSKLNL 286
           +QPAD+F K      F  ++ KL +
Sbjct: 266 DQPADIFNKALHSPRFTLLLHKLKV 290


>gb|ABE88099.1| conserved hypothetical protein [Medicago truncatula]
          Length = 148

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = +2

Query: 14  CSRVNLTLLASSDMGTPQLSPTVL*CDNKSAIHIT-----QECIKHIEIDCYFVCQHMVA 178
           C    LT L   D+    + P VL CDN+SAI+I       EC KH+EIDC+ V + + A
Sbjct: 19  CELQRLTYLLR-DLKVNCIKPPVLYCDNQSAIYIAANPVFHECTKHLEIDCHIVREKLQA 77

Query: 179 KTVHLLPISTTEQPADVFTKTDLPSHFQFMVSKLNL 286
               LLPIS+ +Q AD FTK+ LP  F  ++SKL +
Sbjct: 78  GLFKLLPISSKDQVADFFTKSLLPQPFNPLLSKLGM 113


>gb|ABN09806.1| Polynucleotidyl transferase, Ribonuclease H fold, putative
           [Medicago truncatula]
          Length = 188

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = +2

Query: 50  DMGTPQLSPTVL*CDNKSAIHITQ-----ECIKHIEIDCYFVCQHMVAKTVHLLPISTTE 214
           D+     SP +L  D++SA HI       EC KHI+IDC+FVC+ + A   HLLPI++  
Sbjct: 94  DLQVSFTSPALLYRDSQSARHIASNPTFHECTKHIDIDCHFVCEKLQAHLFHLLPITSIN 153

Query: 215 QPADVFTKTDLPSHFQFMVSK 277
           Q AD FTK    + FQ ++SK
Sbjct: 154 QLADFFTKQLESAPFQRLLSK 174


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = +2

Query: 71   SPTVL*CDNKSAIHITQ-----ECIKHIEIDCYFVCQHMVAKTVHLLPISTTEQPADVFT 235
            +PT+  CDN+SA+HI       E  KH+EIDC+ V + ++  T+ LLP+ST++Q AD  T
Sbjct: 1167 TPTLY-CDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLT 1225

Query: 236  KTDLPSHFQFMVSKLNL 286
            K   P  F   VSKL++
Sbjct: 1226 KALAPPKFHDFVSKLSM 1242


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
 Frame = +2

Query: 50   DMGTPQLSPTVL*CDNKSAIHITQ-----ECIKHIEIDCYFVCQHMVAKTVHLLPISTTE 214
            D+G    S T L CDN+SAIHI       E  KHIEI+C+F+C H+V   + L  +S+ +
Sbjct: 1540 DLGVSTSSATPLYCDNQSAIHIAHNDVFYERTKHIEINCHFICYHLVHGALKLFFVSSKD 1599

Query: 215  QPADVFTKT 241
            Q AD+FTK+
Sbjct: 1600 QLADIFTKS 1608


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