BLASTX nr result

ID: Atractylodes21_contig00048605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048605
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   127   9e-28
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   112   2e-23
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   112   2e-23
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   112   2e-23
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/126 (51%), Positives = 77/126 (61%), Gaps = 14/126 (11%)
 Frame = -1

Query: 338 FNGYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRGG---------SPRNYAV 192
           +NGYGYQA GTYGLM YRLPP+Q+QP F ++ P  NQ NALRGG          PRNYA+
Sbjct: 224 YNGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYAL 283

Query: 191 PPAGYMGSAYPAMPRVQYPLPYPGGM---RPFSGPSSPVPPEVAKNRXXXXXXXXXXXTD 21
           PPA Y+GSAYPA+P +QYP+ YPGGM   RP S     V P V  +              
Sbjct: 284 PPASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGG 343

Query: 20  HVEGPP 3
            +EGPP
Sbjct: 344 QLEGPP 349


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/125 (47%), Positives = 74/125 (59%), Gaps = 13/125 (10%)
 Frame = -1

Query: 338 FNGYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRG--------GSPRNYAVP 189
           +NGYGYQA G YGLMQYR+PP+Q+Q  F N+ P  NQ +A+R          +PRNYAVP
Sbjct: 235 YNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVP 294

Query: 188 PAGYMGSAYPAMPRVQYPLPYPGGM---RPFSGPSSPVPPEVAKNRXXXXXXXXXXXTDH 18
            A YMGSAYPA+P +QYP+ Y GG+   +P SG     PP +  +               
Sbjct: 295 SASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQ 354

Query: 17  VEGPP 3
           VEGPP
Sbjct: 355 VEGPP 359


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/125 (47%), Positives = 74/125 (59%), Gaps = 13/125 (10%)
 Frame = -1

Query: 338 FNGYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRG--------GSPRNYAVP 189
           +NGYGYQA G YGLMQYR+PP+Q+Q  F N+ P  NQ +A+R          +PRNYAVP
Sbjct: 225 YNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVP 284

Query: 188 PAGYMGSAYPAMPRVQYPLPYPGGM---RPFSGPSSPVPPEVAKNRXXXXXXXXXXXTDH 18
            A YMGSAYPA+P +QYP+ Y GG+   +P SG     PP +  +               
Sbjct: 285 SASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQ 344

Query: 17  VEGPP 3
           VEGPP
Sbjct: 345 VEGPP 349


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/125 (47%), Positives = 74/125 (59%), Gaps = 13/125 (10%)
 Frame = -1

Query: 338 FNGYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRG--------GSPRNYAVP 189
           +NGYGYQA G YGLMQYR+PP+Q+Q  F N+ P  NQ +A+R          +PRNYAVP
Sbjct: 279 YNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVP 338

Query: 188 PAGYMGSAYPAMPRVQYPLPYPGGM---RPFSGPSSPVPPEVAKNRXXXXXXXXXXXTDH 18
            A YMGSAYPA+P +QYP+ Y GG+   +P SG     PP +  +               
Sbjct: 339 SASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQ 398

Query: 17  VEGPP 3
           VEGPP
Sbjct: 399 VEGPP 403


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/126 (49%), Positives = 71/126 (56%), Gaps = 14/126 (11%)
 Frame = -1

Query: 338 FNGYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRGG---------SPRNYAV 192
           +NGYGYQA G YGLM YRLPP+QNQP F ++ P  NQ N LRGG         SPRNYA 
Sbjct: 223 YNGYGYQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA- 281

Query: 191 PPAGYMGSAYPAMPRVQYPLPYPGGM---RPFSGPSSPVPPEVAKNRXXXXXXXXXXXTD 21
            PA YMGSAYP +  +QYP+ YPG M   RP S     + P V  +              
Sbjct: 282 -PATYMGSAYPTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGV 340

Query: 20  HVEGPP 3
            VEGPP
Sbjct: 341 QVEGPP 346


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