BLASTX nr result

ID: Atractylodes21_contig00048586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048586
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526135.1| hypothetical protein RCOM_0137170 [Ricinus c...    75   4e-12
ref|XP_002891271.1| predicted protein [Arabidopsis lyrata subsp....    70   1e-10
ref|XP_002891270.1| predicted protein [Arabidopsis lyrata subsp....    70   2e-10
gb|AAF63102.1|AC006423_3 Hypothetical protein [Arabidopsis thali...    69   4e-10
ref|NP_175045.2| RING/FYVE/PHD zinc finger-containing protein [A...    69   4e-10

>ref|XP_002526135.1| hypothetical protein RCOM_0137170 [Ricinus communis]
           gi|223534512|gb|EEF36211.1| hypothetical protein
           RCOM_0137170 [Ricinus communis]
          Length = 366

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
 Frame = +1

Query: 109 VCQTCGDKGFTNAFVYCVKCLDFVIHRYCLKVMPRTFDELVTWYCEQCKA-------TVG 267
           +CQTCGD GF+NA ++C +C  + +H YCL ++P TFDE V W CE C++       +  
Sbjct: 4   ICQTCGDGGFSNALIFCDECQVYAVHCYCLAILPATFDEYVLWLCEDCESIKNLKQKSKK 63

Query: 268 NQVTSPKIKSSRTQKEEVASSGQI 339
            +V S  + +S+    E +SS Q+
Sbjct: 64  RKVNSCSLTNSKVAGLEKSSSVQL 87


>ref|XP_002891271.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337113|gb|EFH67530.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/91 (39%), Positives = 47/91 (51%)
 Frame = +1

Query: 100 KALVCQTCGDKGFTNAFVYCVKCLDFVIHRYCLKVMPRTFDELVTWYCEQCKATVGNQVT 279
           KA VCQTCGD GF  A V+C  C    IHRYC+ + P  F E +TW CE C A+      
Sbjct: 6   KAPVCQTCGDIGFEEALVFCDSCKIESIHRYCIGITPTPFTEYITWICEDCDAS------ 59

Query: 280 SPKIKSSRTQKEEVASSGQIKATHHKKRQKK 372
                 S +   EV  + ++     KK++KK
Sbjct: 60  -----DSDSYCNEVDQTAKLTHILKKKKKKK 85


>ref|XP_002891270.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337112|gb|EFH67529.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 110

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/91 (40%), Positives = 48/91 (52%)
 Frame = +1

Query: 100 KALVCQTCGDKGFTNAFVYCVKCLDFVIHRYCLKVMPRTFDELVTWYCEQCKATVGNQVT 279
           KA VCQTCGD GF  A V+C  C    IHRYC+ + P  F E +TW CE C A+  +   
Sbjct: 6   KAPVCQTCGDIGFEEALVFCDSCKIESIHRYCIGITPTPFTEYITWICEDCDASDSD--- 62

Query: 280 SPKIKSSRTQKEEVASSGQIKATHHKKRQKK 372
           S   +  +T K       + K    KK++KK
Sbjct: 63  SDCNEVDQTPKLTNILKKKTKKKKKKKKKKK 93


>gb|AAF63102.1|AC006423_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = +1

Query: 100 KALVCQTCGDKGFTNAFVYCVKCLDFVIHRYCLKVMPRTFDELVTWYCEQCKATVG---- 267
           K  VCQTCGD GF  A V+C  C+   IHRYCL + P  F E +TW CE C  +      
Sbjct: 6   KGPVCQTCGDIGFEEALVFCDSCMFESIHRYCLGITPIPFTEYITWICEDCDNSESDSDC 65

Query: 268 NQV--TSPKIKSSRTQ 309
           N+V  T  K K SR Q
Sbjct: 66  NEVDQTVKKKKKSRNQ 81


>ref|NP_175045.2| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|332193873|gb|AEE31994.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 371

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
 Frame = +1

Query: 100 KALVCQTCGDKGFTNAFVYCVKCLDFVIHRYCLKVMPRTFDELVTWYCEQCKATVG---- 267
           K  VCQTCGD GF  A V+C  C+   IHRYCL + P  F E +TW CE C  +      
Sbjct: 6   KGPVCQTCGDIGFEEALVFCDSCMFESIHRYCLGITPIPFTEYITWICEDCDNSESDSDC 65

Query: 268 NQV--TSPKIKSSRTQ 309
           N+V  T  K K SR Q
Sbjct: 66  NEVDQTVKKKKKSRNQ 81


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