BLASTX nr result
ID: Atractylodes21_contig00048583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00048583
(310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containi... 136 2e-30
emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera] 136 2e-30
ref|XP_002511599.1| pentatricopeptide repeat-containing protein,... 131 6e-29
ref|XP_002880144.1| pentatricopeptide repeat-containing protein ... 130 1e-28
ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|2... 127 7e-28
>ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera] gi|297734603|emb|CBI16654.3| unnamed
protein product [Vitis vinifera]
Length = 577
Score = 136 bits (343), Expect = 2e-30
Identities = 64/103 (62%), Positives = 83/103 (80%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G+MDCA+++FDEM +RSQVSWTAL+GGY + G++D A FDQM +KD+AAFN MIDAYV
Sbjct: 137 GKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYV 196
Query: 130 KVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
K+GDM A LF+EM E++VVSWT M+ GY S G++ AR+LF
Sbjct: 197 KLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLF 239
Score = 74.3 bits (181), Expect = 9e-12
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G M A+++FDEMPERS VSWT ++ GY+ G +D AR FD MP+K+ ++NAMI Y
Sbjct: 199 GDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYR 258
Query: 130 KVGDMGRASSLFNEM-----LEKNVVSWTSMVDGYCSQGDVGL 17
+ A LF+EM LE + V+ S++ G + L
Sbjct: 259 QNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDL 301
Score = 54.3 bits (129), Expect = 1e-05
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -1
Query: 247 TALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYVKVGDMGRASSLFNEMLEK 77
TAL+ YAK GEI K+R FD MP+K+TA++NA+I+A+ G A LF EM K
Sbjct: 322 TALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHK 378
>emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 136 bits (343), Expect = 2e-30
Identities = 64/103 (62%), Positives = 83/103 (80%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G+MDCA+++FDEM +RSQVSWTAL+GGY + G++D A FDQM +KD+AAFN MIDAYV
Sbjct: 311 GKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYV 370
Query: 130 KVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
K+GDM A LF+EM E++VVSWT M+ GY S G++ AR+LF
Sbjct: 371 KLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLF 413
Score = 75.1 bits (183), Expect = 5e-12
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G M A+++FDEMPERS VSWT ++ GY+ G +D AR FD MP+K+ ++NAMI Y
Sbjct: 373 GDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYX 432
Query: 130 KVGDMGRASSLFNEM-----LEKNVVSWTSMVDGYCSQGDVGL 17
+ A LF+EM LE + V+ S++ G + L
Sbjct: 433 QNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDL 475
Score = 54.3 bits (129), Expect = 1e-05
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -1
Query: 247 TALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYVKVGDMGRASSLFNEMLEK 77
TAL+ YAK GEI K+R FD MP+K+TA++NA+I+A+ G A LF EM K
Sbjct: 496 TALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHK 552
>ref|XP_002511599.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548779|gb|EEF50268.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 429
Score = 131 bits (329), Expect = 6e-29
Identities = 61/103 (59%), Positives = 80/103 (77%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G + A+++FDEM ER VSWTAL+GG + G++ AR+ FDQMP+KD+AA+NAM+D YV
Sbjct: 137 GELCMARKMFDEMAERGVVSWTALIGGCMRSGDMGNARILFDQMPEKDSAAYNAMLDGYV 196
Query: 130 KVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
K GDM A SLF++M +NV+SWTSM+ GYCS GDV AR+LF
Sbjct: 197 KAGDMESAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLF 239
Score = 67.8 bits (164), Expect = 9e-10
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G M+ AQ +FD+MP R+ +SWT+++ GY G++ AR FD MP+++ ++NAMI Y
Sbjct: 199 GDMESAQSLFDKMPARNVISWTSMIYGYCSGGDVLTARSLFDAMPERNLFSWNAMIGGYS 258
Query: 130 KVGDMGRASSLFNEMLEKNV 71
+ A LF+EM + +
Sbjct: 259 QNNKSHEALKLFHEMQSRTL 278
Score = 54.3 bits (129), Expect = 1e-05
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -1
Query: 169 DTAAFNAMIDAYVKVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
D A++D Y K G++ A +F+EM E+ VVSWT+++ G GD+G AR LF
Sbjct: 122 DLYVSTALVDMYAKFGELCMARKMFDEMAERGVVSWTALIGGCMRSGDMGNARILF 177
>ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325983|gb|EFH56403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 555
Score = 130 bits (327), Expect = 1e-28
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPK-KDTAAFNAMIDAY 134
G+M CA+ VFDEMP+RS+VSWTAL+ GY +FGE+D A FDQMP+ KD +NAM+D +
Sbjct: 127 GKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNAMMDGF 186
Query: 133 VKVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
VK GDM A LF+EM K V++WT+M+ GYC+ D+ AR LF
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLF 230
Score = 64.3 bits (155), Expect = 1e-08
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G M A+R+FDEM ++ ++WT ++ GY +ID AR FD MP+++ ++N MI Y
Sbjct: 190 GDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYC 249
Query: 130 KVGDMGRASSLFNEM 86
+ A LF EM
Sbjct: 250 QNKQPQEAIRLFQEM 264
>ref|XP_002326871.1| predicted protein [Populus trichocarpa] gi|222835186|gb|EEE73621.1|
predicted protein [Populus trichocarpa]
Length = 581
Score = 127 bits (320), Expect = 7e-28
Identities = 60/103 (58%), Positives = 78/103 (75%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G + A++VF++MP+RS VSWTAL+GGY + G++ A F MP +D+AAFN +ID YV
Sbjct: 151 GNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYV 210
Query: 130 KVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
KVGDM A SLF+EM E+NV+SWTSM+ GYC+ GDV AR LF
Sbjct: 211 KVGDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLF 253
Score = 72.0 bits (175), Expect = 5e-11
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = -1
Query: 310 GRMDCAQRVFDEMPERSQVSWTALVGGYAKFGEIDKARMFFDQMPKKDTAAFNAMIDAYV 131
G M+ A+ +FDEMPER+ +SWT+++ GY G++ AR FD MP+K+ ++NAMI Y
Sbjct: 213 GDMESARSLFDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYC 272
Query: 130 KVGDMGRASSLFNEM-----LEKNVVSWTSMVDGYCSQGDVGL 17
+ A LF E+ E N V+ S++ + G + L
Sbjct: 273 QNKQPHEALKLFRELQSSTVFEPNEVTVVSILPAIATLGALEL 315
Score = 55.1 bits (131), Expect = 6e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = -1
Query: 169 DTAAFNAMIDAYVKVGDMGRASSLFNEMLEKNVVSWTSMVDGYCSQGDVGLARTLF 2
D A++D Y K G++G A +FN+M ++++VSWT+++ GY +GD+G A LF
Sbjct: 136 DMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVRRGDMGNAWFLF 191