BLASTX nr result
ID: Atractylodes21_contig00048572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00048572
(326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 125 4e-27
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 124 8e-27
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 147 bits (370), Expect = 1e-33
Identities = 67/108 (62%), Positives = 88/108 (81%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F LI+KL +DM+R+G VPD+WAYN+YLN+LC E+ +D+AL V+ MVE GREPD+V+YT
Sbjct: 95 FVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTI 154
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKVDL 3
VI+GL RA +FD AV++W+ M++KG PD KACR L+LGLC GKVDL
Sbjct: 155 VINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDL 202
Score = 68.6 bits (166), Expect = 5e-10
Identities = 37/95 (38%), Positives = 53/95 (55%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KL M +G +PD Y ++ LC + MA V DMVE+G PDVVSY +I+GL
Sbjct: 380 KLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGL 439
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGL 27
RA + EA+ +++ M G PD +++I GL
Sbjct: 440 CRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGL 474
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -1
Query: 296 MNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLMRAEQ 117
M R G PD+ YN+ LN C E L++ A ++ M +G EPDV SY ++ GL +A +
Sbjct: 245 MRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANR 304
Query: 116 FDEA-VQMWQAMIQKGLRPDAKACRVLILGLC 24
D+A + M M KGL D + +I LC
Sbjct: 305 LDKAYMMMVNKMEAKGL-CDVVSYNTIIKALC 335
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = -1
Query: 308 LFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLM 129
+F DM G PD+ +YN +N LC S V A+ + DM G PD V++ +I GL+
Sbjct: 416 VFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLI 475
Query: 128 RAEQFDEAVQMWQAMIQKGLRPDAKACRVLI 36
++ A ++W M++KG D L+
Sbjct: 476 WEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506
Score = 58.5 bits (140), Expect = 5e-07
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = -1
Query: 314 DKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISG 135
+ L + M R G PD+++YN L LC + +D A ++ + +E DVVSY T+I
Sbjct: 274 ENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKA 333
Query: 134 LMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLI 36
L A A ++++ M KG+ PD +LI
Sbjct: 334 LCTASHTKRAYKLFEEMGGKGITPDVVTFTILI 366
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/101 (29%), Positives = 51/101 (50%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KLF++M G PD+ + + + E ++A ++L M G PD V YTT++ L
Sbjct: 345 KLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL 404
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKV 9
+ + A ++ M++ G+ PD + LI GLC +V
Sbjct: 405 CKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRV 445
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 130 bits (327), Expect = 1e-28
Identities = 56/108 (51%), Positives = 83/108 (76%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F LI +L +DM ++G +PD+WA+N+YLN+L E+L+++AL+ +MV GREPDVV+YT
Sbjct: 95 FGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTI 154
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKVDL 3
++ L +A+Q+D+AV+ W+ M+ KGL PD KAC L++GLC GKVDL
Sbjct: 155 IVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDL 202
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = -1
Query: 308 LFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLM 129
L Q M + +PD+ Y ++ C ++MA V DM+E G PDVVSY +I+GL
Sbjct: 380 LLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLC 439
Query: 128 RAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGL 27
+A + EA+ +++ M +G PD +++I GL
Sbjct: 440 KASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGL 473
Score = 63.9 bits (154), Expect = 1e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = -1
Query: 308 LFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLM 129
+F+DM IG PD+ +YN +N LC S V A+ + +M G PD V++ +I GL+
Sbjct: 415 VFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLL 474
Query: 128 RAEQFDEAVQMWQAMIQKGLRPDAKACRVLI 36
R ++ A Q+W M++KG D LI
Sbjct: 475 RKKELSLACQVWDQMMEKGYTLDKFLSETLI 505
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = -1
Query: 296 MNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLMRAEQ 117
M++ G PD+ YN+ LN C ++++A + + M G EPDV SY ++ GL +A +
Sbjct: 245 MSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANR 304
Query: 116 FDEAVQMWQAMIQKGLRPDAKACRVLILGLC 24
D+A ++ M +KGL D + +I LC
Sbjct: 305 LDKAYKLMNTMWEKGL-CDTVSYNTVIGALC 334
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = -1
Query: 320 LIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVI 141
L K + M RIG PD+++YN L LC + +D A +++ M E G D VSY TVI
Sbjct: 272 LAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVI 330
Query: 140 SGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLI 36
L ++ +A ++++ M QK + PD LI
Sbjct: 331 GALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLI 365
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 125 bits (314), Expect = 4e-27
Identities = 57/108 (52%), Positives = 79/108 (73%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F LID L +DM +G +PD+WA+N+YL++LC E+ V A++ MV+ GREPDVVSYT
Sbjct: 95 FELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKVDL 3
+I+GL RA + +AV++W AMI+ G+ PD KAC L++GLC KVDL
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KL M +G PD Y L+ LC VD A + DM+E+ PD +SY ++ISGL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGL 440
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGL 27
R+ + EA+++++ M K PD + +I GL
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/101 (31%), Positives = 54/101 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KLF++M + G V ++ + + E +A ++L M E G PD + YTT++ L
Sbjct: 346 KLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKV 9
++ D+A ++ MI+ + PDA + LI GLC G+V
Sbjct: 406 CKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRV 446
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 124 bits (311), Expect = 8e-27
Identities = 57/108 (52%), Positives = 78/108 (72%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F LID L DM +G +PD+WA+N+YL++LC E+ V A++ MV+ GREPDVVSYT
Sbjct: 95 FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKVDL 3
+I+GL RA + +AV++W AMI+ G+ PD KAC L++GLC KVDL
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Score = 63.9 bits (154), Expect = 1e-08
Identities = 35/95 (36%), Positives = 51/95 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KL M +G PD Y L+ LC VD A V DM+E+ PD +SY ++ISGL
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGL 27
R+ + EA+++++ M K PD + +I GL
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/101 (31%), Positives = 54/101 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
+LF++M + G V ++ Y + E +A ++L M E G PD + YTT++ L
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKV 9
++ D+A ++ MI+ + PDA + LI GLC G+V
Sbjct: 406 CKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/106 (30%), Positives = 54/106 (50%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F L + ++ DM +G + Y+ +++ LC D+ +L+DM G PD+ ++
Sbjct: 60 FELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNV 119
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKV 9
+ L R + AVQ + M+Q+G PD + +LI GL GKV
Sbjct: 120 YLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKV 165
>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 123 bits (308), Expect = 2e-26
Identities = 57/108 (52%), Positives = 76/108 (70%)
Frame = -1
Query: 326 FRLIDKLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTT 147
F ID L +DM ++ VPD+WA+N+YLN+L E+ + AL V MVE GREPDVV++T
Sbjct: 95 FTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTI 154
Query: 146 VISGLMRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKVDL 3
+I GL + ++FD AVQ W M+ KG+RPD KAC L +GLC G+VDL
Sbjct: 155 IIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDL 202
Score = 62.8 bits (151), Expect = 3e-08
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KL M +G +PD Y ++ C V+MA + DMVE G PDVVSY +I+G
Sbjct: 381 KLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGF 440
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLCGVGKV 9
++ + E + +++ M+Q+G PD +++I L K+
Sbjct: 441 CKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKL 481
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/96 (32%), Positives = 51/96 (53%)
Frame = -1
Query: 311 KLFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGL 132
KLF++M R G PD+ + + + E DMA ++L M G PD + YTT+I
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405
Query: 131 MRAEQFDEAVQMWQAMIQKGLRPDAKACRVLILGLC 24
++ + + A ++ M++KG+ PD + LI G C
Sbjct: 406 CKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFC 441
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = -1
Query: 308 LFQDMNRIGAVPDMWAYNMYLNVLCSESLVDMALRVLADMVENGREPDVVSYTTVISGLM 129
+F DM G PD+ +YN +N C V + + M++ G PD V+Y +I L+
Sbjct: 417 IFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALV 476
Query: 128 RAEQFDEAVQMWQAMIQKGLRPDAKACRVLI 36
R + +A ++W M+++GL D +LI
Sbjct: 477 RENKLSDACRVWDQMMERGLTLDRGISEMLI 507