BLASTX nr result

ID: Atractylodes21_contig00048547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048547
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   102   4e-20
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   100   9e-20
emb|CBI27010.3| unnamed protein product [Vitis vinifera]              100   1e-19

>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/103 (59%), Positives = 77/103 (74%)
 Frame = -1

Query: 313 PQRNVISWNTLLGAYLNNGLLDEVILLFEKMKAEKTTSPDYLTITTSLSACAGLGLLEKG 134
           P++NVI+WNT++  YL+  L  E + LF++MKA    + D+LT+T  LSACA LG L KG
Sbjct: 209 PKKNVITWNTMISGYLHAQLYAEAVDLFDEMKAGNHEA-DHLTVTLVLSACAHLGWLGKG 267

Query: 133 REIHVYAQDLRLMSSPHVTTSLIDMYAKCGCVESFLNVFYKSK 5
            E+HVYAQD RL SSPHV TSLIDMYAKCG ++  L VFYKS+
Sbjct: 268 TEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQ 310


>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/103 (56%), Positives = 75/103 (72%)
 Frame = -1

Query: 313 PQRNVISWNTLLGAYLNNGLLDEVILLFEKMKAEKTTSPDYLTITTSLSACAGLGLLEKG 134
           P +N+I+WNT++  +L N L  EV+ LF++MK      PDYLT+T  LSACA  G L+KG
Sbjct: 205 PAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCL-PDYLTVTGVLSACAHSGSLKKG 263

Query: 133 REIHVYAQDLRLMSSPHVTTSLIDMYAKCGCVESFLNVFYKSK 5
            E+H+YA D  L SSPHVTT+LIDMYAKCG ++  L VFYKS+
Sbjct: 264 TEVHIYAIDNGLASSPHVTTALIDMYAKCGSIQQGLQVFYKSQ 306


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/103 (50%), Positives = 70/103 (67%)
 Frame = -1

Query: 313 PQRNVISWNTLLGAYLNNGLLDEVILLFEKMKAEKTTSPDYLTITTSLSACAGLGLLEKG 134
           P +N ++WNT++   L +     V+ LFE+MK      PDYLT+T+ LS C  LG L  G
Sbjct: 205 PVKNTVTWNTMITGCLQSEHFGMVLDLFEEMKTANYI-PDYLTVTSVLSTCGHLGSLGTG 263

Query: 133 REIHVYAQDLRLMSSPHVTTSLIDMYAKCGCVESFLNVFYKSK 5
            +IH+YA D  L+SSPHVTT+LIDMY+KCG +E  L+VF KS+
Sbjct: 264 IKIHIYAIDNGLVSSPHVTTALIDMYSKCGSIEQGLHVFCKSQ 306


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/113 (50%), Positives = 74/113 (65%), Gaps = 12/113 (10%)
 Frame = -1

Query: 307  RNVISWNTLLGAYLNNG-------LLD-----EVILLFEKMKAEKTTSPDYLTITTSLSA 164
            ++++SWN+++ A  N G       L D       + LF++MKA    + D+LT+   LSA
Sbjct: 984  KDIVSWNSMILACTNVGDMGNARNLFDVMPKKNAVDLFDEMKAGNHEA-DHLTVALVLSA 1042

Query: 163  CAGLGLLEKGREIHVYAQDLRLMSSPHVTTSLIDMYAKCGCVESFLNVFYKSK 5
            CA LG L KG E+HVYAQD RL SSPHV TSLIDMYAKCG ++  L VFYKS+
Sbjct: 1043 CAHLGWLGKGTEMHVYAQDHRLASSPHVATSLIDMYAKCGTIQRSLEVFYKSQ 1095


>emb|CBI27010.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/99 (46%), Positives = 68/99 (68%)
 Frame = -1

Query: 313 PQRNVISWNTLLGAYLNNGLLDEVILLFEKMKAEKTTSPDYLTITTSLSACAGLGLLEKG 134
           P+RN+ SWN L+G Y +NGL  EV+  F++M +E    P+  T+ T LSACA LG L+ G
Sbjct: 133 PERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLG 192

Query: 133 REIHVYAQDLRLMSSPHVTTSLIDMYAKCGCVESFLNVF 17
           + +HVYA+   L  + +V  +L+DMYAKCG +E+ ++VF
Sbjct: 193 KWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVF 231


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