BLASTX nr result

ID: Atractylodes21_contig00048535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048535
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34329.1| Integrase core domain containing protein [Solanum...    62   6e-08
gb|ABI34342.1| Polyprotein, putative [Solanum demissum]                62   6e-08
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    60   2e-07
emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]    60   2e-07
emb|CAN74101.1| hypothetical protein VITISV_039542 [Vitis vinifera]    60   2e-07

>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = -1

Query: 234 LPSIVLKDQIHH*VLFPGTRLFVVPPINFDCICYVHNI-Q*NE*T*PRAHLCIFVG--RS 64
           +PS  +++Q+ H +LFP + L+ +PP  F   C+VHN+    +   PRA  C+F+G  R 
Sbjct: 683 MPSSSIQNQVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYSRV 742

Query: 63  QKEYRCYDHHLKQHYVS 13
           QK YRCY H L ++ +S
Sbjct: 743 QKGYRCYSHDLHRYLMS 759


>gb|ABI34342.1| Polyprotein, putative [Solanum demissum]
          Length = 1054

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
 Frame = -1

Query: 234 LPSIVLKDQIHH*VLFPGTRLFVVPPINFDCICYVHNI-Q*NE*T*PRAHLCIFVG--RS 64
           +PS  +++Q+ H +LFP + L+ +PP  F   C+VHN+    +   PRA  C+F+G  R 
Sbjct: 444 MPSSSIQNQVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYSRV 503

Query: 63  QKEYRCYDHHLKQHYVS 13
           QK YRCY H L ++ +S
Sbjct: 504 QKGYRCYSHDLHRYLMS 520


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = -1

Query: 234 LPSIVLKDQIHH*VLFPGTRLFVVPPINFDCICYVHNIQ*N-E*T*PRAHLCIFVG--RS 64
           +PS VL ++I H +LFP   L  +PP  F   C+VHN     +   PR+H C+F+G  RS
Sbjct: 678 MPSSVLDNKIPHSILFPHDPLHSLPPKVFGSTCFVHNFSPGLDKLSPRSHKCVFLGFTRS 737

Query: 63  QKEYRCYDHHLKQHYVS 13
           QK Y+C+   L ++++S
Sbjct: 738 QKGYKCFSPSLNRYFIS 754


>emb|CAN66243.1| hypothetical protein VITISV_015916 [Vitis vinifera]
          Length = 1258

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -1

Query: 234 LPSIVLKDQIHH*VLFPGTRLFVVPPINFDCICYVHNIQ-*NE*T*PRAHLCIFVG--RS 64
           +PS VL DQI H +LFP   L+ +PP  F C C+V N+    +    RA  CIF+G  R 
Sbjct: 610 MPSFVLHDQIPHSLLFPDQPLYFLPPHVFGCTCFVQNLTLGQDKLSARATKCIFLGYSRL 669

Query: 63  QKEYRCYDHHLKQHYVS 13
           QK YRCY     ++++S
Sbjct: 670 QKGYRCYSSETHRYFLS 686


>emb|CAN74101.1| hypothetical protein VITISV_039542 [Vitis vinifera]
          Length = 1265

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
 Frame = -1

Query: 234 LPSIVLKDQIHH*VLFPGTRLFVVPPINFDCICYVHNI-Q*NE*T*PRAHLCIFVG--RS 64
           +PS VL DQI H +LFP   L+ +PP  F C C+VH +    +    RA  CIF+G  R 
Sbjct: 553 MPSSVLHDQIPHSLLFPDQPLYFLPPRVFGCTCFVHILTPGQDKLSARATKCIFLGYSRL 612

Query: 63  QKEYRCYDHHLKQHYVS 13
           QK+YRCY     ++++S
Sbjct: 613 QKDYRCYSSKTHRYFLS 629


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