BLASTX nr result

ID: Atractylodes21_contig00048506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048506
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]    102   5e-20
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]          99   3e-19
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...    98   1e-18
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...    98   1e-18
ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203...    94   1e-17

>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
          Length = 1487

 Score =  102 bits (253), Expect = 5e-20
 Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
 Frame = -1

Query: 547 CETMATVCFTCNAQGHLSRDCPK-KAGDQGIRDKGQASGTDARDRTAQPRT--------G 395
           C    T CF C  +GH  ++CPK K G   +  + Q+S   A  RTA PR         G
Sbjct: 335 CRDGQTGCFECGKEGHFMKECPKNKQGSGNLGSRAQSSSV-APPRTA-PRGATSSTGGGG 392

Query: 394 ARVFAMTATQETD---GMVAALVYIDNRDYYALFDTGATHS----VVATKYEKYLKPYIR 236
            R++A+T+  E +    +V  ++ +   D YAL D GA+ S     VA K++  L+    
Sbjct: 393 NRLYAITSPHEQEISPNVVTCMIKVFAFDVYALLDPGASLSFVTPYVANKFDVLLERLCE 452

Query: 235 PLNDWFSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHR 56
           P    F ++TP+G +  AE  Y DCP+ I  +  +  L+ LDM+ DFD+I GMDWL    
Sbjct: 453 P----FCVSTPVGESILAERVYCDCPVSINHKSTMADLVDLDMV-DFDVISGMDWLHACY 507

Query: 55  VTIDCKAKKVIFGDVNEP 2
            ++DC+ + V F   NEP
Sbjct: 508 TSLDCRTRVVKFQFPNEP 525


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
 Frame = -1

Query: 547 CETMATVCFTCNAQGHLSRDCPK-KAGDQGIRDKGQASGTDARDRTAQ----PRTGA--- 392
           C    T CF C  +GH  ++CPK K   + +  + Q+S     DR A       TG    
Sbjct: 291 CRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPPDRMASRGATSSTGGGAN 350

Query: 391 RVFAMTATQETDG---MVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDW 221
           R++A+T+  E +    +V  ++ +   + YAL D GA+ S V        +     L + 
Sbjct: 351 RLYAITSRHEQENSPNVVTGMIKVFVFNVYALLDPGASLSFVTPYVANQFEVLPERLCEP 410

Query: 220 FSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDC 41
           F ++TP+G +  AE  Y DCP+ I  +     L+ LDM+ +FD+ILGMDWL     ++DC
Sbjct: 411 FCVSTPVGESILAERVYRDCPVSISHKSTKADLVELDMV-NFDVILGMDWLHACYASLDC 469

Query: 40  KAKKVIFGDVNEP 2
           + + V F  +NEP
Sbjct: 470 RTRAVKFQFLNEP 482



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
 Frame = -1

Query: 547  CETMATVCFTCNAQGHLSRDCPK-KAGDQGIRDKGQASGTDARDRTAQ----PRTGA--- 392
            C    T CF C  +GH  ++CPK K   + +  + Q+S     DR A       TG    
Sbjct: 1801 CRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPLDRMASRGATSSTGGGAN 1860

Query: 391  RVFAMTATQETDG---MVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDW 221
            R++A+T+  E +    +V  ++ +   + YAL D GA+ S V        +     L + 
Sbjct: 1861 RLYAITSRHEQENSPNVVTGMIKVFVFNVYALLDPGASLSFVTPYVANQFEVLPERLCEP 1920

Query: 220  FSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDC 41
            F ++TP+G +  AE  Y DCP+ I  +     L+ LDM+ +FD+ILGMDWL     ++DC
Sbjct: 1921 FCVSTPVGESILAERVYRDCPVSISHKSTKADLVELDMV-NFDVILGMDWLHACYASLDC 1979

Query: 40   KAKKVIFGDVNEP 2
            + + V F  +NEP
Sbjct: 1980 RTRAVKFQFLNEP 1992



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
 Frame = -1

Query: 547  CETMATVCFTCNAQGHLSRDCPK-KAGDQGIRDKGQASGTDARDRTAQ----PRTGA--- 392
            C    T CF C  +GH  ++CPK K   + +  + Q+S     DR A       TG    
Sbjct: 3311 CRQGQTCCFRCGQEGHFMKECPKNKQSSEKLGSRAQSSSISPLDRMASRGATSSTGGGAN 3370

Query: 391  RVFAMTATQETDG---MVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDW 221
            R++A+T+  E +    +V  ++ +   + YAL D GA+ S V        +     L + 
Sbjct: 3371 RLYAITSRHEQENSPNVVTGMIKVFVFNVYALLDPGASLSFVTPYVANQFEVLPERLCEP 3430

Query: 220  FSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDC 41
            F ++TP+G +  AE  Y DCP+ I  +     L+ LDM+ +FD+ILGMDWL     ++DC
Sbjct: 3431 FCVSTPVGESILAERVYRDCPVSISHKSTKADLVELDMV-NFDVILGMDWLHACYASLDC 3489

Query: 40   KAKKVIFGDVNEP 2
            + + V F  +NEP
Sbjct: 3490 RTRAVKFQFLNEP 3502


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
 Frame = -1

Query: 547 CETMATVCFTCNAQGHLSRDCPKK-AGDQGIRDKGQASGTDARDRT----AQPRTGA--- 392
           C    T CF C  +GH  ++CPK   G   +  + Q+S     DR     A   TG    
Sbjct: 393 CRDGQTGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGGGAN 452

Query: 391 RVFAMTATQETDG---MVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDW 221
           R++A+T+  E +    +V A++ +     YAL D GA+ S V              L + 
Sbjct: 453 RLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEP 512

Query: 220 FSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDC 41
           F ++TP+G +  AE  Y DCP+ I  +  +V L+ LDM+ DFD+ILGMDWL     +IDC
Sbjct: 513 FCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMV-DFDVILGMDWLHACYASIDC 571

Query: 40  KAKKVIFGDVNEP 2
           + + V F   +EP
Sbjct: 572 RTRVVKFQFPSEP 584


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
 Frame = -1

Query: 547 CETMATVCFTCNAQGHLSRDCPKK-AGDQGIRDKGQASGTDARDRT----AQPRTGA--- 392
           C    T CF C  +GH  ++CPK   G   +  + Q+S     DR     A   TG    
Sbjct: 387 CRDGQTGCFKCGQEGHFVKECPKNNQGSGSLGSRTQSSSVAPPDRMTPRGATSSTGGGAN 446

Query: 391 RVFAMTATQETDG---MVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDW 221
           R++A+T+  E +    +V A++ +     YAL D GA+ S V              L + 
Sbjct: 447 RLYAITSRHEQENSPNVVTAMIKVFAFYVYALLDPGASLSFVTPYVANKFDVLPERLCEP 506

Query: 220 FSIATPMGVTRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDC 41
           F ++TP+G +  AE  Y DCP+ I  +  +V L+ LDM+ DFD+ILGMDWL     +IDC
Sbjct: 507 FCVSTPVGESILAERVYRDCPVSINHKSTMVDLIELDMV-DFDVILGMDWLHACYASIDC 565

Query: 40  KAKKVIFGDVNEP 2
           + + V F   +EP
Sbjct: 566 RTRVVKFQFPSEP 578


>ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203289 [Cucumis sativus]
          Length = 655

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 2/178 (1%)
 Frame = -1

Query: 547 CETMATVCFTCNAQGHLSRDCPKKAGDQGIRDKGQASGTDARDRTAQPRTGARVFAMTAT 368
           C     VC+ C  +GH++  CP ++   G   +G+           +P     +FA   +
Sbjct: 359 CLMGTRVCYKCKQEGHMADRCPLRSTGAGSSSQGE-----------RPPQRGTIFATNRS 407

Query: 367 Q--ETDGMVAALVYIDNRDYYALFDTGATHSVVATKYEKYLKPYIRPLNDWFSIATPMGV 194
           +  +   +V   + +       LFD+G++HS +++ +  +    + PL+   S++TP G 
Sbjct: 408 EAEKAGTVVTGTLPVLGHFALTLFDSGSSHSFISSLFVTHACLEVEPLDYVLSVSTPSGE 467

Query: 193 TRYAEDEYVDCPLRIGDRIWVVTLLPLDMMKDFDLILGMDWLTKHRVTIDCKAKKVIF 20
              ++++   C + I  R+  VTLL LD M+DFD+ILGMDWL  +  +IDC  K+V+F
Sbjct: 468 IMLSKEKIKACEIEIAGRVLDVTLLVLD-MRDFDVILGMDWLATNHASIDCSRKEVVF 524


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