BLASTX nr result

ID: Atractylodes21_contig00048468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048468
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]   168   5e-40
ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
ref|XP_002866679.1| pentatricopeptide repeat-containing protein ...   151   6e-35

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/145 (57%), Positives = 113/145 (77%)
 Frame = -2

Query: 435 KTLAPSISPSHVTSLFYNNPNLNPQTALSFFNLLSQRSNFKPTVESFASLLTILIKNEFL 256
           + L PS++PSHV+SLF  N  L+PQTALSFFN ++ R  FK  V S++S+L ILI+   L
Sbjct: 60  RKLLPSLTPSHVSSLFAFN--LDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117

Query: 255 NVAEKVRISMLKACETEEDARFALGLLRKMNVDEEFPFKLSIRCYNTLLMCLSRFLMIDD 76
            VAEK+RISM+K+C + ED  F L + RKMN D EF FK ++RCYNT+LM LS+FL+ID+
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 75  MRCVFLEMLDDEIMPNIYTYNSMVN 1
           M+ V+LE+L+++I PNIYT+N+MVN
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVN 202


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/145 (57%), Positives = 113/145 (77%)
 Frame = -2

Query: 435 KTLAPSISPSHVTSLFYNNPNLNPQTALSFFNLLSQRSNFKPTVESFASLLTILIKNEFL 256
           + L PS++PSHV+SLF  N  L+PQTALSFFN ++ R  FK  V S++S+L ILI+   L
Sbjct: 60  RKLLPSLTPSHVSSLFAFN--LDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117

Query: 255 NVAEKVRISMLKACETEEDARFALGLLRKMNVDEEFPFKLSIRCYNTLLMCLSRFLMIDD 76
            VAEK+RISM+K+C + ED  F L + RKMN D EF FK ++RCYNT+LM LS+FL+ID+
Sbjct: 118 GVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDE 177

Query: 75  MRCVFLEMLDDEIMPNIYTYNSMVN 1
           M+ V+LE+L+++I PNIYT+N+MVN
Sbjct: 178 MKTVYLELLNNQISPNIYTFNAMVN 202


>ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|222833564|gb|EEE72041.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/145 (57%), Positives = 107/145 (73%), Gaps = 2/145 (1%)
 Frame = -2

Query: 429 LAPSISPSHVTSLFYNNPNLNPQTALSFFNLLSQ-RSNFKPTVESFASLLTILIKNEFLN 253
           L P++SPSHV+SLF N+P+LNP  AL FFN L   +  FK TV+S + LL ILI N    
Sbjct: 78  LIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFG 137

Query: 252 VAEKVRISMLKACETEEDARFALGLLRKMNVDE-EFPFKLSIRCYNTLLMCLSRFLMIDD 76
           V EK+RISM+KAC + +D RF L  LR+MN D+ +  FKLS+R YN LLM L+RFLMID+
Sbjct: 138 VGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDE 197

Query: 75  MRCVFLEMLDDEIMPNIYTYNSMVN 1
           M+ V+ EML+D I+PNIYT N+MVN
Sbjct: 198 MKRVYTEMLNDMIVPNIYTLNTMVN 222


>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449522905|ref|XP_004168466.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/146 (54%), Positives = 109/146 (74%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 KTLAPSISPSHVTSLFYNNPNLNPQTALSFFNLLSQRSNFKPTVESFASLLTILIKNEFL 256
           K L PSI+PSH+++LF  N  L+PQTAL+FFN + Q+  FK  V+S  S+L IL+ N +L
Sbjct: 69  KNLIPSIAPSHISALFALN--LDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYL 126

Query: 255 NVAEKVRISMLKACETEEDARFALGLLRKMNVD-EEFPFKLSIRCYNTLLMCLSRFLMID 79
            +AE +RI M+K+ ++ E+A F L +LR MN   + F FKL++RCYN LLM LSRFLMID
Sbjct: 127 RIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMID 186

Query: 78  DMRCVFLEMLDDEIMPNIYTYNSMVN 1
           +M+ V+LEMLDD + PNI+T N+MVN
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVN 212


>ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312514|gb|EFH42938.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 915

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/147 (51%), Positives = 110/147 (74%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 KTLAPSISPSHVTSLFYNNPNLNPQTALSFFNLLSQRSNFKPTVESFASLLTILIKNEFL 256
           K++ P+ISPSHV+SLF  + +L+P+TAL+F + +SQ   +K +V S+ASLLT+LI N ++
Sbjct: 82  KSMVPAISPSHVSSLF--SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV 139

Query: 255 NVAEKVRISMLKACETEEDARFALGLLRKMNVDEEF--PFKLSIRCYNTLLMCLSRFLMI 82
            V  K+R+ M+K+C++  D  F L L RKMN DE F   +KL I CYNTLL  L+RF ++
Sbjct: 140 GVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLV 199

Query: 81  DDMRCVFLEMLDDEIMPNIYTYNSMVN 1
           D+M+ V++EML+D++ PNIYTYN MVN
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVN 226


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