BLASTX nr result

ID: Atractylodes21_contig00048405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048405
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   200   1e-49
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]              197   9e-49
ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [S...   193   2e-47
ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [S...   193   2e-47
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   189   3e-46

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/161 (60%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
 Frame = -1

Query: 482 LSDDQRRDLGTLFSQFMAVFREQ-GLPPPRIQDHAISLIPGHSLVAVRPYRFPHIQKAEI 306
           L+ +Q R+L  L   +  VF+E  GLPP R ++H I+L  G   V VRPYR+PH  K EI
Sbjct: 339 LASEQSRELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEI 398

Query: 305 E*QVAELLSLGLIRPSQSSFSCPVILVRKKDQSWRMCVDYRALNKATVPDKYPIPVVDEL 126
           E QV E+L  G+IR S SSFS PVILV++KD SWRMC+DYRALNKATVPDK+PIPV++EL
Sbjct: 399 EKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKFPIPVIEEL 458

Query: 125 IDELADAHFFSKLDLKSGYNQIRMRLDSVDKTAFRTHDGHY 3
           +DEL  A F+SKLDLKSGY+Q+R++ + + KTAFRTH+ HY
Sbjct: 459 LDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFRTHEDHY 499


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score =  197 bits (501), Expect = 9e-49
 Identities = 97/153 (63%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
 Frame = -1

Query: 458  LGTLFSQFMAVFRE-QGLPPPRIQDHAISLIPGHSLVAVRPYRFPHIQKAEIE*QVAELL 282
            L  L  QF  VF E QGLPP R  DH I L+PG + VAVRPYR+P +QK E+E Q + +L
Sbjct: 901  LDDLLRQFELVFAEPQGLPPARPYDHRIHLLPGAAPVAVRPYRYPQLQKDELERQCSAML 960

Query: 281  SLGLIRPSQSSFSCPVILVRKKDQSWRMCVDYRALNKATVPDKYPIPVVDELIDELADAH 102
            + G+IRPS S FS PV+LVRK D SWR C+DYRALN  T  DK+PIPVVDEL+DEL  AH
Sbjct: 961  AQGIIRPSTSPFSAPVLLVRKPDNSWRFCIDYRALNAKTSKDKFPIPVVDELLDELHGAH 1020

Query: 101  FFSKLDLKSGYNQIRMRLDSVDKTAFRTHDGHY 3
            FF+KLDL+SGY+Q+RM    V+KTAFRTH+GHY
Sbjct: 1021 FFTKLDLRSGYHQVRMHPADVEKTAFRTHEGHY 1053


>ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
            gi|241943813|gb|EES16958.1| hypothetical protein
            SORBIDRAFT_08g009530 [Sorghum bicolor]
          Length = 1574

 Score =  193 bits (490), Expect = 2e-47
 Identities = 97/160 (60%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479  SDDQRRDLGTLFSQFMAVFRE-QGLPPPRIQDHAISLIPGHSLVAVRPYRFPHIQKAEIE 303
            +D Q+  L  L  Q  A+F E QGLPP R  DH I L+PG   VAVRPYR+P +QK E+E
Sbjct: 681  TDIQQPLLDRLLHQHAAIFEEPQGLPPARPYDHRIHLLPGTPPVAVRPYRYPQLQKDELE 740

Query: 302  *QVAELLSLGLIRPSQSSFSCPVILVRKKDQSWRMCVDYRALNKATVPDKYPIPVVDELI 123
             Q   +L+ G+IRPS S FS PV+LVRK D+SWR C+DYRALN  T  DK+PIPVVDEL+
Sbjct: 741  RQCEAMLTQGIIRPSTSPFSAPVLLVRKADKSWRFCIDYRALNAKTSKDKFPIPVVDELL 800

Query: 122  DELADAHFFSKLDLKSGYNQIRMRLDSVDKTAFRTHDGHY 3
            DEL  A FF+KLDL+SGY+Q+RM  + V KTAFRTH GHY
Sbjct: 801  DELHGARFFTKLDLRSGYHQVRMHPEDVAKTAFRTHHGHY 840


>ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
            gi|241943812|gb|EES16957.1| hypothetical protein
            SORBIDRAFT_08g009520 [Sorghum bicolor]
          Length = 1595

 Score =  193 bits (490), Expect = 2e-47
 Identities = 97/160 (60%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479  SDDQRRDLGTLFSQFMAVFRE-QGLPPPRIQDHAISLIPGHSLVAVRPYRFPHIQKAEIE 303
            +D Q+  L  L  Q  A+F E QGLPP R  DH I L+PG   VAVRPYR+P +QK E+E
Sbjct: 681  TDIQQPLLDRLLHQHAAIFEEPQGLPPARPYDHRIHLLPGTPPVAVRPYRYPQLQKDELE 740

Query: 302  *QVAELLSLGLIRPSQSSFSCPVILVRKKDQSWRMCVDYRALNKATVPDKYPIPVVDELI 123
             Q   +L+ G+IRPS S FS PV+LVRK D+SWR C+DYRALN  T  DK+PIPVVDEL+
Sbjct: 741  RQCEAMLTQGIIRPSTSPFSAPVLLVRKADKSWRFCIDYRALNAKTSKDKFPIPVVDELL 800

Query: 122  DELADAHFFSKLDLKSGYNQIRMRLDSVDKTAFRTHDGHY 3
            DEL  A FF+KLDL+SGY+Q+RM  + V KTAFRTH GHY
Sbjct: 801  DELHGARFFTKLDLRSGYHQVRMHPEDVAKTAFRTHHGHY 840


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/170 (56%), Positives = 121/170 (71%), Gaps = 1/170 (0%)
 Frame = -1

Query: 509  NEWVQQLPCLSDDQRRDLGTLFSQFMAVFRE-QGLPPPRIQDHAISLIPGHSLVAVRPYR 333
            +E VQ++P       + +  + +Q   +F    GLPP R  DHAI LI G S V VRPYR
Sbjct: 1194 SEGVQEVP-------KTVKEVLAQHQQIFEPITGLPPSRDIDHAIQLILGASPVNVRPYR 1246

Query: 332  FPHIQKAEIE*QVAELLSLGLIRPSQSSFSCPVILVRKKDQSWRMCVDYRALNKATVPDK 153
            +PHI K EI+  V E+L  G++RPS S FS PV+LV+KKD  WR C+DYRALNK TVPD+
Sbjct: 1247 YPHILKNEIKRLVQEMLEAGIVRPSLSPFSSPVLLVKKKDGGWRFCIDYRALNKVTVPDR 1306

Query: 152  YPIPVVDELIDELADAHFFSKLDLKSGYNQIRMRLDSVDKTAFRTHDGHY 3
            +PIPV+DEL+D+L  A  FSKLDLKSGY+QIR+R   + KTAFRTH+GHY
Sbjct: 1307 FPIPVIDELLDKLHGATIFSKLDLKSGYHQIRVRQQDIPKTAFRTHEGHY 1356


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