BLASTX nr result

ID: Atractylodes21_contig00048378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048378
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631463.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-41
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...   140   1e-31
ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_003631463.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Vitis vinifera]
          Length = 486

 Score =  172 bits (437), Expect = 2e-41
 Identities = 87/155 (56%), Positives = 108/155 (69%)
 Frame = +3

Query: 3   NRFITELSYSPEAKYLQRACDIILFLSKEKXXXXXXXXXXXXXXXXXXAQMPIPASIILR 182
           +R ITELSYS    +LQ+ACD++  + KEK                  AQMPIPAS+ILR
Sbjct: 65  SRLITELSYSSNPHWLQKACDLVYLILKEKSDLLHSDSLTKLSLSLSRAQMPIPASMILR 124

Query: 183 IMIEKGNIPPRNLLGTFVLHMVKKEIGTYLASNILIQICDHLQHLGSNRSMHADMIKPDT 362
           +M+EKG++P +N+L   +LHMVK EIGTYLASN L+QICDH   L +++S HA +IKPDT
Sbjct: 125 LMLEKGSVPQKNVLWLIILHMVKTEIGTYLASNYLVQICDHFLLLSASKSNHAKLIKPDT 184

Query: 363 IIFNLVLDACSSHNLSFKAQQIIELMSQIGVVGDA 467
           +IFNLVLDAC     SFK QQIIELM Q+GV  DA
Sbjct: 185 MIFNLVLDACVRFGSSFKGQQIIELMPQVGVGADA 219


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/155 (47%), Positives = 100/155 (64%)
 Frame = +3

Query: 3   NRFITELSYSPEAKYLQRACDIILFLSKEKXXXXXXXXXXXXXXXXXXAQMPIPASIILR 182
           N  I+ LSYS +  +LQ+ACD++  + KEK                  AQMP+PAS+ILR
Sbjct: 110 NMLISRLSYSSDHHWLQKACDLVFLILKEKPGLLQFPVLTKLSISLARAQMPVPASMILR 169

Query: 183 IMIEKGNIPPRNLLGTFVLHMVKKEIGTYLASNILIQICDHLQHLGSNRSMHADMIKPDT 362
           +M+E+ N+PP  +L + V HMVK EIG  LASN L+Q+CD   HL +  S+ A ++KPD 
Sbjct: 170 VMLERENMPPLTILWSVVSHMVKTEIGACLASNFLVQMCDCFLHLSAKGSVRAKVVKPDA 229

Query: 363 IIFNLVLDACSSHNLSFKAQQIIELMSQIGVVGDA 467
           +IFNLVLDAC     S K Q+I+ELMS+ GV+ DA
Sbjct: 230 MIFNLVLDACVKFKSSLKGQEIVELMSKAGVIADA 264


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/154 (45%), Positives = 100/154 (64%)
 Frame = +3

Query: 6   RFITELSYSPEAKYLQRACDIILFLSKEKXXXXXXXXXXXXXXXXXXAQMPIPASIILRI 185
           R + ELSYS + ++LQ+AC+++  + KEK                  AQMPIPAS++LR+
Sbjct: 101 RLLAELSYSSDPRWLQKACNLVSQIFKEKSDLLPTETLTKLSLSFARAQMPIPASMVLRV 160

Query: 186 MIEKGNIPPRNLLGTFVLHMVKKEIGTYLASNILIQICDHLQHLGSNRSMHADMIKPDTI 365
           ++E+ N P  +LL   V HMVK E+GT LASN LIQIC+ L  + +NR+ HA +IK DT+
Sbjct: 161 ILERENTPAVSLLRLIVFHMVKTEVGTCLASNFLIQICECLLRISANRNDHAKVIKLDTL 220

Query: 366 IFNLVLDACSSHNLSFKAQQIIELMSQIGVVGDA 467
           IFNLVL+ C     S K Q+++E MS+ G++ DA
Sbjct: 221 IFNLVLEGCVRFKSSLKGQELVEWMSRTGIIADA 254


>ref|XP_004148385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Cucumis sativus]
           gi|449530891|ref|XP_004172425.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g17616-like [Cucumis sativus]
          Length = 714

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/152 (46%), Positives = 96/152 (63%)
 Frame = +3

Query: 12  ITELSYSPEAKYLQRACDIILFLSKEKXXXXXXXXXXXXXXXXXXAQMPIPASIILRIMI 191
           +++LSY+ + K L +A +++L   KEK                  +QMPIPAS ILR+M+
Sbjct: 127 VSQLSYTSDCKRLHKAYNLVLQNWKEKPVVLQLDTLTKLVLGLARSQMPIPASEILRLML 186

Query: 192 EKGNIPPRNLLGTFVLHMVKKEIGTYLASNILIQICDHLQHLGSNRSMHADMIKPDTIIF 371
           +   +P   LL   +LHMVK E+GTYLASNIL+QICD      ++R+  A  +KPDT++F
Sbjct: 187 QTRRLPRMELLQLVILHMVKSEVGTYLASNILVQICDCFLQQATSRNDQAKSMKPDTMLF 246

Query: 372 NLVLDACSSHNLSFKAQQIIELMSQIGVVGDA 467
           NLVL AC    LSFK QQ++ELMSQ  VV DA
Sbjct: 247 NLVLHACVRFKLSFKGQQLVELMSQTEVVADA 278


>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Glycine max]
          Length = 684

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/155 (41%), Positives = 90/155 (58%)
 Frame = +3

Query: 3   NRFITELSYSPEAKYLQRACDIILFLSKEKXXXXXXXXXXXXXXXXXXAQMPIPASIILR 182
           N+ I +LSYS    ++++ CD++L + +EK                   QM  PAS++LR
Sbjct: 96  NQLIVQLSYSSNHAWMRKTCDLVLQIVREKSGLLHADTLTKLALSLARLQMTCPASVVLR 155

Query: 183 IMIEKGNIPPRNLLGTFVLHMVKKEIGTYLASNILIQICDHLQHLGSNRSMHADMIKPDT 362
           +M++KG +P  +LL   V H+ K EIGTYLASN L Q+CD    L   +  HA  ++ DT
Sbjct: 156 LMLDKGCVPSMHLLSLVVFHIAKTEIGTYLASNYLFQVCDFYNCLNDKKGNHAVKVELDT 215

Query: 363 IIFNLVLDACSSHNLSFKAQQIIELMSQIGVVGDA 467
           ++FNLVLDAC    LS K   +IELMS  G V DA
Sbjct: 216 LVFNLVLDACVRFKLSLKGLSLIELMSMTGTVADA 250


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