BLASTX nr result

ID: Atractylodes21_contig00048356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048356
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    82   6e-14
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    67   2e-09
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    67   2e-09
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    65   6e-09
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    58   9e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
 Frame = -3

Query: 351  SLAKRPYEKLVA*FYGPFTVLQCVGHVAYRLQLPTDP---PRISRLPIETGCGRSALLPF 181
            SLAKRP+EKL   FYGPFTVLQ +G  AY+LQLP      P      ++   G + +LP 
Sbjct: 1468 SLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPT 1527

Query: 180  AATKSETKP*DXXXXXXXXGCPIR*LMHGSQ--AEVLIQWKGLPQSEATWEEV------F 25
                 +                +R +  G Q   E LI+WKGLP  EATWE++      F
Sbjct: 1528 IPPHIDVDM--ELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRF 1585

Query: 24   PAFHLEDK 1
            P+FHLEDK
Sbjct: 1586 PSFHLEDK 1593


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/129 (38%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
 Frame = -3

Query: 351  SLAKRPYEKLVA*FYGPFTVLQCVGHVAYRLQLPTDPP-----RISRLPIETGCGR-SAL 190
            SLAKR  EKL   +YGPF VL+ +G VAY L LP          IS+L    G      +
Sbjct: 1237 SLAKRLNEKLAPRYYGPFPVLKRIGTVAYELDLPPHSKIHPVFHISQLRKAVGTAPVFPV 1296

Query: 189  LPFAATKSETKP*DXXXXXXXXGCPIR*LMHGSQAEVLIQWKGLPQSEATWEEV------ 28
            LP   T     P            P   L   + AE+L+QW  +   EATWE V      
Sbjct: 1297 LPPLLTTDLVLPSSPSQVLGIRPNP---LNQAAPAEILVQWSDMSADEATWENVQDIHER 1353

Query: 27   FPAFHLEDK 1
            FP FHLEDK
Sbjct: 1354 FPTFHLEDK 1362


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 51/132 (38%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
 Frame = -3

Query: 351  SLAKRPYEKLVA*FYGPFTVLQCVGHVAYRLQLPTDPP-----RISRLPIETGCGRSA-L 190
            SLAK+  EKL   FYGPF+VL+ +G VAY+LQLP          IS+L    G  +S+  
Sbjct: 1401 SLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPT 1460

Query: 189  LPFAATKS---ETKP*DXXXXXXXXGCPIR*LMHGSQAEVLIQWKGLPQSEATWEEV--- 28
            +P   T     + +P            P          EVLI+W  LP  EATWE+    
Sbjct: 1461 IPPQLTNDLVLDAQPESLLNIRSHPQKP------AEVTEVLIKWLNLPAFEATWEDAALF 1514

Query: 27   ---FPAFHLEDK 1
               FP FHLEDK
Sbjct: 1515 NARFPDFHLEDK 1526


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
 Frame = -3

Query: 351 SLAKRPYEKLVA*FYGPFTVLQCVGHVAYRLQLPTDPP-----RISRLPIETGCGRSAL- 190
           SLAK+  EKL A FYGP+ V++ +G VAYRL LP +        IS+L +   C    + 
Sbjct: 569 SLAKKRCEKLAAKFYGPYRVMEEIGEVAYRLDLPLEAMIHNVFHISQLKLRL-CKTQHIQ 627

Query: 189 -LPFAATKSETKP*DXXXXXXXXGCPIR*LMHGSQAEVLIQWKGLPQSEATWEEV----- 28
            LP A T+                  +R        + L++WKGL  SEATWE V     
Sbjct: 628 HLPPALTED-----FELQVESEAVLGVRWNSEMGANDWLVKWKGLHDSEATWESVYAMNQ 682

Query: 27  -FPAFHLEDK 1
            +P+FHLEDK
Sbjct: 683 QYPSFHLEDK 692


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
 Frame = -3

Query: 351  SLAKRPYEKLVA*FYGPFTVLQCVGHVAYRLQLPTDP---PRISRLPIETGCGRSALL-P 184
            SLAKRP EKL   ++GP+ V+Q +G VAYRL+LP+     P      ++   G + L  P
Sbjct: 1900 SLAKRPNEKLSPRYFGPYKVVQQIGPVAYRLKLPSSTSIHPVFHVSQLKRALGSADLCQP 1959

Query: 183  FAATKSETKP*DXXXXXXXXGCPIR*LMHGSQAEVLIQWKGLPQSEATWEEV------FP 22
             +   +E                +  L+   Q       KGLPQ EA+WE V      FP
Sbjct: 1960 LSPILTE---------------DLEWLVEPDQ-------KGLPQFEASWESVDTIKEHFP 1997

Query: 21   AFHLEDK 1
             FHLEDK
Sbjct: 1998 DFHLEDK 2004