BLASTX nr result

ID: Atractylodes21_contig00048354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048354
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...    89   5e-16
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...    79   3e-13
emb|CBI39502.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    74   2e-11
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
 Frame = -3

Query: 431 LRFSVKHSRTSASSSYERDFSELIEAYTRNQKYSKKNILISPALVD-SRDNASGTSVGTS 255
           LRFSVKHSRTS+ SSYE+DFSEL++ YT+++   KK  + S  L D S D+ S      S
Sbjct: 371 LRFSVKHSRTSSPSSYEKDFSELMDVYTKSKVGKKKQKIFSQELDDASDDSTSSADRSLS 430

Query: 254 SQDEISKSWLDCTEERASFESDEDLTLPSESCALASKRNELSVEYXXXXXXXXXXXXXXD 75
             D +S S ++   +    E+D++     E+ + ASK+ ++SVEY              D
Sbjct: 431 EADRMSPSDVENNGDGYFGENDDEANSSQENGSAASKQRQMSVEYLENEVDLFQSVDDWD 490

Query: 74  VTCGEFDGQSSTK 36
           V+CGEF GQ  T+
Sbjct: 491 VSCGEFSGQPPTE 503


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis]
           gi|223548380|gb|EEF49871.1| DNA helicase, putative
           [Ricinus communis]
          Length = 803

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
 Frame = -3

Query: 431 LRFSVKHSRTSASSSYERDFSELIEAYTRNQKY-SKKNILISPALVDSRDNASGTSVGTS 255
           L+FSVKHSRTS+ SSYE+DF +LI+ Y R +   +K   + S  + D   NA+  S+  S
Sbjct: 277 LQFSVKHSRTSSPSSYEKDFRKLIDIYVRKRNAGTKTQRMFSKVVNDCSGNAADQSL--S 334

Query: 254 SQDEISKSWLDCTEERASFESDEDLTLPSESCALASKRNELSVEYXXXXXXXXXXXXXXD 75
            +D  S S +  TE+  S   D+++TL  E+ + AS+   LS++Y              D
Sbjct: 335 EEDVFSSSGMISTEDECSDVDDDEVTLTKENGSTASEGKRLSIDYLENDVDIFQNVDDWD 394

Query: 74  VTCGEFDGQSSTKASDV 24
           V  GEF GQS     DV
Sbjct: 395 VAFGEFCGQSPCNDWDV 411


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/132 (40%), Positives = 72/132 (54%)
 Frame = -3

Query: 431 LRFSVKHSRTSASSSYERDFSELIEAYTRNQKYSKKNILISPALVDSRDNASGTSVGTSS 252
           LRFSVKHSRTS+ SSYE+DFSEL++ YT+++   KK  + S  L D+ D++      TSS
Sbjct: 350 LRFSVKHSRTSSPSSYEKDFSELMDVYTKSKVGKKKQKIFSQELDDASDDS------TSS 403

Query: 251 QDEISKSWLDCTEERASFESDEDLTLPSESCALASKRNELSVEYXXXXXXXXXXXXXXDV 72
            D            R+  E+D       E+ A ASK+ ++SVEY              DV
Sbjct: 404 AD------------RSLSEADRMSPSDVENNA-ASKQRQMSVEYLENEVDLFQSVDDWDV 450

Query: 71  TCGEFDGQSSTK 36
           +CGEF GQ  T+
Sbjct: 451 SCGEFSGQPPTE 462


>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           SIM-like [Cucumis sativus]
          Length = 821

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/136 (37%), Positives = 71/136 (52%)
 Frame = -3

Query: 431 LRFSVKHSRTSASSSYERDFSELIEAYTRNQKYSKKNILISPALVDSRDNASGTSVGTSS 252
           LRFSVKHSRTS+ SSY +DFS+LI+ Y  N+++  K   I     DS  + S T  G   
Sbjct: 298 LRFSVKHSRTSSPSSYRKDFSKLIDVYAGNRRFGNKKQTIISHKPDSVLDCS-TDCGLYE 356

Query: 251 QDEISKSWLDCTEERASFESDEDLTLPSESCALASKRNELSVEYXXXXXXXXXXXXXXDV 72
            D+IS + L+ T++  S + D+++    E     SK   +SVEY              DV
Sbjct: 357 VDKISPNDLEDTDDSDS-DKDDEVDSSEECLPSPSKERTMSVEYLENEVDVFQSVDDWDV 415

Query: 71  TCGEFDGQSSTKASDV 24
             GEF GQ   + +DV
Sbjct: 416 AYGEFCGQLVCEDTDV 431


>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
 Frame = -3

Query: 431 LRFSVKHSRTSASSSYERDFSELIEAYTRNQKYSKKN-ILISPALVDSRDNASGTSVG-- 261
           LRFSVKH RTS+ SSY ++ S LI  Y   +K ++K    I+  L D  D+++  S+   
Sbjct: 371 LRFSVKHCRTSSPSSYGKNLSHLIGIYAGKKKSNEKKWSSIAEELDDCSDSSADNSISDG 430

Query: 260 -TSSQDEISKSWLDCTEERASFESDEDLTLPSESCALASKRNELSVEYXXXXXXXXXXXX 84
             SS +++++   DC +        ++L L  E+   AS+  E+S+EY            
Sbjct: 431 DVSSPNDMNRIEDDCCDV-----DGDELNLTKENGLTASREKEMSIEYLENDVDVFHIVD 485

Query: 83  XXDVTCGEFDGQSSTKASDVCASSD 9
             DV CGEF GQS  K   +C SS+
Sbjct: 486 DWDVACGEFIGQSPCKDQYICKSSE 510


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