BLASTX nr result

ID: Atractylodes21_contig00048347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048347
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               78   2e-21
ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810...    84   6e-21
ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813...    49   5e-09
ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [S...    44   9e-08
gb|ABA98602.2| retrotransposon protein, putative, unclassified [...    59   1e-07

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 78.2 bits (191), Expect(2) = 2e-21
 Identities = 41/99 (41%), Positives = 55/99 (55%)
 Frame = +3

Query: 96  NQFITLYGTKPMLPQSAQFHHLCRMNNTGAIVETYALEIHSMPGSSWDTFVPPTELPPDL 275
           ++FITL G        AQ HH  R+ NT +I E +A+++             PT + P+L
Sbjct: 503 DKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQLIQKEVPEDTLKDLPTNIDPEL 562

Query: 276 RSLLRQFQDVFATPTGLPPSRVQDHSIPLMEGSNPVKVK 392
             LL  +  VFA P  LPP R QDH+IPL +GS PVKV+
Sbjct: 563 AILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVR 601



 Score = 49.3 bits (116), Expect(2) = 2e-21
 Identities = 18/30 (60%), Positives = 29/30 (96%)
 Frame = +1

Query: 1   TGAALVLGASWLATIGPHIADFSALSLKFY 90
           +GA ++LG++WLAT+GPH+AD++AL+LKF+
Sbjct: 471 SGADVILGSTWLATLGPHVADYAALTLKFF 500


>ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
          Length = 1273

 Score = 83.6 bits (205), Expect(2) = 6e-21
 Identities = 42/104 (40%), Positives = 59/104 (56%)
 Frame = +3

Query: 81  QILFGNQFITLYGTKPMLPQSAQFHHLCRMNNTGAIVETYALEIHSMPGSSWDTFVPPTE 260
           + L   +FITL G     P  A  HH+ RM +T +I E +++++       +     P  
Sbjct: 422 KFLHDGKFITLQGDDDGTPTQAHLHHIRRMISTDSIAEVFSMQLIEPSNFQFPLSELPIN 481

Query: 261 LPPDLRSLLRQFQDVFATPTGLPPSRVQDHSIPLMEGSNPVKVK 392
           L P+L  LL  ++ VF TPT LPP +  DH+IPL+EGS PVKVK
Sbjct: 482 LEPELALLLHTYEFVFETPTSLPPPKSHDHAIPLLEGSKPVKVK 525



 Score = 42.0 bits (97), Expect(2) = 6e-21
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +1

Query: 1   TGAALVLGASWLATIGPHIADFSALSLKF 87
           +GA L+LGA WL T+G HIAD+ +L +KF
Sbjct: 395 SGADLILGAIWLKTLGSHIADYDSLQIKF 423


>ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
          Length = 2140

 Score = 48.5 bits (114), Expect(2) = 5e-09
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = +3

Query: 153 HHLCRMNNTGAIVETYALEIHSMPGSSWDTFVPPTELPPDLRSLLRQFQDVFATPTGLPP 332
           H + R+ +T +    + L +  +P S      P     P +  LL ++Q +F  PTGLPP
Sbjct: 352 HQVRRLISTKSTSGLFHLSLQPIPSSEMLNTTPHPV--PAIDKLLNKYQSLFEAPTGLPP 409

Query: 333 SRVQDHSIPLMEGSNPVKVK 392
            R  DH I L+  ++P+ V+
Sbjct: 410 PRQHDHQINLLPSAHPINVR 429



 Score = 36.6 bits (83), Expect(2) = 5e-09
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +1

Query: 1   TGAALVLGASWLATIGPHIADFSALSLKFYL 93
           +GA +VLG  WL T+GP I D++  ++KF L
Sbjct: 301 SGADVVLGVEWLRTLGPVITDYTDFTMKFTL 331


>ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
           gi|241933637|gb|EES06782.1| hypothetical protein
           SORBIDRAFT_04g018075 [Sorghum bicolor]
          Length = 1414

 Score = 44.3 bits (103), Expect(2) = 9e-08
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +3

Query: 273 LRSLLRQFQDVFATPTGLPPSRVQDHSIPLMEGSNPVKVK 392
           L  LL  + D+F  P+G+PP R +DH+I L  GS PV V+
Sbjct: 435 LDGLLAAYDDIFTEPSGMPPPRARDHAITLKPGSAPVVVR 474



 Score = 36.6 bits (83), Expect(2) = 9e-08
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +1

Query: 4   GAALVLGASWLATIGPHIADFSALSLKF-YLGISLLPCMVQNLCYPNLPNSITYAE*TIL 180
           G  +VLG  W+AT+GP + DF+A SL F Y G +     V +   P+L  + T +  ++L
Sbjct: 377 GYDIVLGTQWMATLGPIVWDFAARSLSFTYQGRAFCWAGVPSTGAPSL-RAATASSASLL 435

Query: 181 EPLL 192
           + LL
Sbjct: 436 DGLL 439


>gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2202

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
 Frame = +3

Query: 99   QFITLYGTKPMLPQSA-----QFHHLCRMNNTGAIVETYALEIHSMPGSSWDTFVPPTEL 263
            Q ITL G  P +  +      + H L +  +   +V+ Y L+  S              +
Sbjct: 866  QLITLCGVVPSVSANPVLSVLELHQLYQSGSIEGLVQLYTLDSESSSD---------LPI 916

Query: 264  PPDLRSLLRQFQDVFATPTGLPPSRVQDHSIPLMEGSNPVKVK 392
            P +++ LL+ F DVF  P GLPP R  DH+IPL+ G+ PV V+
Sbjct: 917  PDNIQQLLQSFADVFQEPQGLPPVREYDHTIPLIPGAQPVNVR 959



 Score = 21.9 bits (45), Expect(2) = 1e-07
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 13  LVLGASWLATIGPHIADFSALSLKFYLGISLL 108
           ++LG  WL    P   D+   +++F L   L+
Sbjct: 837 MILGMDWLERYSPMDIDWQQKTIRFTLDGQLI 868


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