BLASTX nr result

ID: Atractylodes21_contig00048346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048346
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    59   3e-07
ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [S...    58   7e-07
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    55   6e-06
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               55   6e-06
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...    54   1e-05

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +3

Query: 27  PAPPLSDA-PGLLGPSHAQALHAD--SSIVP---PTSPWQWFPPVNTDQPTDLSQVFNTM 188
           P  P + A PG+LGP  +Q  HA   +++ P   P++P    PP        L   FNTM
Sbjct: 301 PFQPTNAAHPGILGPHPSQPTHAAHMANVYPYPTPSAPMSQLPP-------GLIHAFNTM 353

Query: 189 TLQDNPDATWYMDTGATSHLVSDSGSADS 275
           TLQ+ PD  WYMD+ ATSH+ S+ G+  S
Sbjct: 354 TLQE-PDPNWYMDSAATSHITSNIGNLQS 381


>ref|XP_002439641.1| hypothetical protein SORBIDRAFT_09g017840 [Sorghum bicolor]
           gi|241944926|gb|EES18071.1| hypothetical protein
           SORBIDRAFT_09g017840 [Sorghum bicolor]
          Length = 787

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/89 (40%), Positives = 44/89 (49%)
 Frame = +3

Query: 9   APLSRHPAPPLSDAPGLLGPSHAQALHADSSIVPPTSPWQWFPPVNTDQPTDLSQVFNTM 188
           AP    PAPP   A  + GP      H     + P    Q  PP   DQ   L+  F TM
Sbjct: 400 APTPHAPAPPTHQAY-VAGPPAQWVGHWGVPPLAPVPAPQSPPPPGWDQQA-LAASFETM 457

Query: 189 TLQDNPDATWYMDTGATSHLVSDSGSADS 275
           +L   P   WY DTGATSH+ SD+GS+D+
Sbjct: 458 SLTQPPQRDWYFDTGATSHMASDTGSSDA 486


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +3

Query: 54  GLLGPSHAQALHADSSIVPPTSPWQWFPPVNTDQPTDLSQVFNTMTLQDNPDATWYMDTG 233
           GLL P H+Q  +A      P S              DL++ FNT +LQD PD+ WYMD+G
Sbjct: 240 GLLPPYHSQQSNAHFRTPKPEST------------ADLAEAFNTFSLQDPPDSQWYMDSG 287

Query: 234 ATSHLVSDSGS 266
           AT++L S +G+
Sbjct: 288 ATAYLTSGAGN 298


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/71 (40%), Positives = 40/71 (56%)
 Frame = +3

Query: 54  GLLGPSHAQALHADSSIVPPTSPWQWFPPVNTDQPTDLSQVFNTMTLQDNPDATWYMDTG 233
           GLL P H+Q  +A      P S              DL++ FNT +LQD PD+ WYMD+G
Sbjct: 236 GLLPPYHSQQSNAHFRTPKPEST------------ADLAEAFNTFSLQDPPDSQWYMDSG 283

Query: 234 ATSHLVSDSGS 266
           AT++L S +G+
Sbjct: 284 ATAYLTSGAGN 294


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
 Frame = +3

Query: 21  RHPAPPLSDAPGLLGPS-HAQALHADSSIVP--------PTSPWQWFPPVNTD-QPTDLS 170
           +HPA     AP +LG +  AQ+L A +S  P        P +P  W    NT      L 
Sbjct: 495 QHPA-----APSVLGHAGQAQSLAASTSYQPVFAATPSTPGTPASWNGSANTQWDQQGLI 549

Query: 171 QVFNTMTLQDNPDATWYMDTGATSHLVSDSGS 266
             FNT++L   P + WY+D+GA+SH+ SD+G+
Sbjct: 550 NAFNTVSLSQPPSSDWYIDSGASSHMTSDAGT 581


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