BLASTX nr result

ID: Atractylodes21_contig00048342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048342
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191625.1| spindle and kinetochore-associated protein 1-li...    55   9e-06
ref|XP_002876574.1| hypothetical protein ARALYDRAFT_486539 [Arab...    55   9e-06
ref|XP_001769343.1| predicted protein [Physcomitrella patens sub...    55   9e-06

>ref|NP_191625.1| spindle and kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
           gi|75181374|sp|Q9LZZ7.1|SKA1_ARATH RecName: Full=Spindle
           and kinetochore-associated protein 1 homolog
           gi|7329676|emb|CAB82670.1| putative protein [Arabidopsis
           thaliana] gi|26450283|dbj|BAC42258.1| unknown protein
           [Arabidopsis thaliana] gi|28827580|gb|AAO50634.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646573|gb|AEE80094.1| spindle and
           kinetochore-associated protein 1-like protein
           [Arabidopsis thaliana]
          Length = 272

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 155 EGQHFFLETDVKGPTLKLDNTGKAILTV 72
           +G+HFFLETD+KGP+LKLDNTGKAILTV
Sbjct: 221 KGKHFFLETDMKGPSLKLDNTGKAILTV 248


>ref|XP_002876574.1| hypothetical protein ARALYDRAFT_486539 [Arabidopsis lyrata subsp.
           lyrata] gi|297322412|gb|EFH52833.1| hypothetical protein
           ARALYDRAFT_486539 [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 155 EGQHFFLETDVKGPTLKLDNTGKAILTV 72
           +G+HFFLETD+KGP+LKLDNTGKAILTV
Sbjct: 221 KGKHFFLETDMKGPSLKLDNTGKAILTV 248


>ref|XP_001769343.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679449|gb|EDQ65897.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 340

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 33/64 (51%), Positives = 41/64 (64%)
 Frame = -3

Query: 248 MAFGVIMLLIPSFDPILAIAGNKKDWNGRRSEGQHFFLETDVKGPTLKLDNTGKAILTVS 69
           MAFG   LL+     I AIA N K        G+HFFLE+D+KG  LKLD+TGKA+LTVS
Sbjct: 201 MAFGFPFLLLQELRDI-AIAENVK--------GKHFFLESDLKGEVLKLDHTGKAVLTVS 251

Query: 68  CLSL 57
            + +
Sbjct: 252 TVMI 255


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