BLASTX nr result

ID: Atractylodes21_contig00048315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048315
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   122   2e-28
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   125   3e-28
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               122   6e-28
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   124   2e-27
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   124   2e-27

>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  122 bits (305), Expect(2) = 2e-28
 Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2    FERCLSEHILFTKSKEG-KCLIVSVYVDYLIFTGNDTKMLEKFKNAMKQEFNLSDIGKMK 178
            F +C  EH LFTK+ EG K LIV +YVD LIFTGND  M ++FK +M  EF+++D+ K++
Sbjct: 747  FNKCPYEHTLFTKTAEGGKILIVCLYVDELIFTGNDESMFKQFKKSMMVEFDMTDLEKLR 806

Query: 179  YFLGVEVVQGSGGIFINQTKYANEVLKRFSIMNCNPVKKP 298
            YFLG+EV+Q + GIFINQ KYA EVL+RF++  CNPV  P
Sbjct: 807  YFLGIEVMQKTDGIFINQRKYAQEVLERFNLYQCNPVHNP 846



 Score = 28.9 bits (63), Expect(2) = 2e-28
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 294 NPVVPGFILTKDKVG 338
           NPVVPGF LT+DK G
Sbjct: 845 NPVVPGFKLTRDKEG 859


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  125 bits (315), Expect(2) = 3e-28
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2    FERCLSEHILFTKSKEG-KCLIVSVYVDYLIFTGNDTKMLEKFKNAMKQEFNLSDIGKMK 178
            FERC  +H LF K+ +G K LIVS+YVD LIFTGND  M  KFKN+MK EF+++D+GKMK
Sbjct: 768  FERCSCDHTLFIKTGDGGKILIVSLYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMK 827

Query: 179  YFLGVEVVQGSGGIFINQTKYANEVLKRFSIMNCNPVKKP 298
            YFLGVEV+Q S GI+I+Q KYA EVL+RF +   N VK P
Sbjct: 828  YFLGVEVLQNSEGIYISQRKYAKEVLERFGMEKSNSVKNP 867



 Score = 24.3 bits (51), Expect(2) = 3e-28
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 291 KNPVVPGFILTKDKVG 338
           KNP+VPG  LTK++ G
Sbjct: 865 KNPIVPGDRLTKNEGG 880


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  122 bits (306), Expect(2) = 6e-28
 Identities = 60/99 (60%), Positives = 73/99 (73%)
 Frame = +2

Query: 2    FERCLSEHILFTKSKEGKCLIVSVYVDYLIFTGNDTKMLEKFKNAMKQEFNLSDIGKMKY 181
            FERC SEH LFTK++ G  LIVS+YVD LIFTG+D  M ++FK +M  EF +SD+GKMK+
Sbjct: 996  FERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKH 1055

Query: 182  FLGVEVVQGSGGIFINQTKYANEVLKRFSIMNCNPVKKP 298
            FLG+EV Q  GGIFI Q +YA EVL RF +   N VK P
Sbjct: 1056 FLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNP 1094



 Score = 26.6 bits (57), Expect(2) = 6e-28
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 291  KNPVVPGFILTKDKVG 338
            KNP+VPG  LTKD+ G
Sbjct: 1092 KNPIVPGTKLTKDENG 1107


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis thaliana]
          Length = 1334

 Score =  124 bits (310), Expect(2) = 2e-27
 Identities = 56/99 (56%), Positives = 74/99 (74%)
 Frame = +2

Query: 2    FERCLSEHILFTKSKEGKCLIVSVYVDYLIFTGNDTKMLEKFKNAMKQEFNLSDIGKMKY 181
            FE+C  EH LF K +    L+VSVYVD LI+TG+  +M+E FKN+M +EF ++D+GKMKY
Sbjct: 995  FEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKY 1054

Query: 182  FLGVEVVQGSGGIFINQTKYANEVLKRFSIMNCNPVKKP 298
            FLGVEV+Q   GIFINQ KYA E++K++ +  CN VK P
Sbjct: 1055 FLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNP 1093



 Score = 23.1 bits (48), Expect(2) = 2e-27
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 291  KNPVVPGFILTKDKVG 338
            KNP+VPG  LTK   G
Sbjct: 1091 KNPIVPGQKLTKAGAG 1106


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
            gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1334

 Score =  124 bits (310), Expect(2) = 2e-27
 Identities = 56/99 (56%), Positives = 74/99 (74%)
 Frame = +2

Query: 2    FERCLSEHILFTKSKEGKCLIVSVYVDYLIFTGNDTKMLEKFKNAMKQEFNLSDIGKMKY 181
            FE+C  EH LF K +    L+VSVYVD LI+TG+  +M+E FKN+M +EF ++D+GKMKY
Sbjct: 995  FEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKY 1054

Query: 182  FLGVEVVQGSGGIFINQTKYANEVLKRFSIMNCNPVKKP 298
            FLGVEV+Q   GIFINQ KYA E++K++ +  CN VK P
Sbjct: 1055 FLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNP 1093



 Score = 23.1 bits (48), Expect(2) = 2e-27
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 291  KNPVVPGFILTKDKVG 338
            KNP+VPG  LTK   G
Sbjct: 1091 KNPIVPGQKLTKAGAG 1106


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