BLASTX nr result

ID: Atractylodes21_contig00048311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048311
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515190.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_002880277.1| At2g47010/F14M4.16 [Arabidopsis lyrata subsp...    94   2e-17
ref|XP_002302804.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
gb|AAC34224.2| expressed protein [Arabidopsis thaliana]                93   2e-17
ref|NP_566093.4| uncharacterized protein [Arabidopsis thaliana] ...    93   2e-17

>ref|XP_002515190.1| conserved hypothetical protein [Ricinus communis]
           gi|223545670|gb|EEF47174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 482

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/66 (66%), Positives = 50/66 (75%)
 Frame = +3

Query: 180 VHLLVALAIVNXXXXXXXXXAVGDPGMKRDGLRVAFEAWNFCNEVGTEAPSMGSPRAADC 359
           V  LV++ +           AVGDPGM+RDGLRVAFEAWNFCNEVG EAP MGSPRAADC
Sbjct: 12  VFFLVSVVLFGAVNGKQYSSAVGDPGMRRDGLRVAFEAWNFCNEVGQEAPDMGSPRAADC 71

Query: 360 FDISST 377
           FD+SS+
Sbjct: 72  FDLSSS 77


>ref|XP_002880277.1| At2g47010/F14M4.16 [Arabidopsis lyrata subsp. lyrata]
           gi|297326116|gb|EFH56536.1| At2g47010/F14M4.16
           [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 240 AVGDPGMKRDGLRVAFEAWNFCNEVGTEAPSMGSPRAADCFDISS 374
           AVGDPGMKRDGLRVAFEAWNFCNEVG EAP MGSPRAADCFD+SS
Sbjct: 24  AVGDPGMKRDGLRVAFEAWNFCNEVGFEAPHMGSPRAADCFDVSS 68


>ref|XP_002302804.1| predicted protein [Populus trichocarpa] gi|222844530|gb|EEE82077.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +3

Query: 240 AVGDPGMKRDGLRVAFEAWNFCNEVGTEAPSMGSPRAADCFDISST 377
           AVGDPGM+RDGLRVAFEAWNFCNEVG EAP MGSPRAADCFD+SS+
Sbjct: 29  AVGDPGMRRDGLRVAFEAWNFCNEVGQEAPGMGSPRAADCFDLSSS 74


>gb|AAC34224.2| expressed protein [Arabidopsis thaliana]
          Length = 451

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 240 AVGDPGMKRDGLRVAFEAWNFCNEVGTEAPSMGSPRAADCFDISS 374
           AVGDPGMKRDGLRVAFEAWNFCNEVG EAP MGSPRAADCFD+SS
Sbjct: 24  AVGDPGMKRDGLRVAFEAWNFCNEVGFEAPHMGSPRAADCFDLSS 68


>ref|NP_566093.4| uncharacterized protein [Arabidopsis thaliana]
           gi|240254670|ref|NP_973705.4| uncharacterized protein
           [Arabidopsis thaliana]
           gi|16612271|gb|AAL27503.1|AF439832_1 At2g47010/F14M4.16
           [Arabidopsis thaliana] gi|23506161|gb|AAN31092.1|
           At2g47010/F14M4.16 [Arabidopsis thaliana]
           gi|330255692|gb|AEC10786.1| uncharacterized protein
           [Arabidopsis thaliana] gi|330255693|gb|AEC10787.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 493

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 240 AVGDPGMKRDGLRVAFEAWNFCNEVGTEAPSMGSPRAADCFDISS 374
           AVGDPGMKRDGLRVAFEAWNFCNEVG EAP MGSPRAADCFD+SS
Sbjct: 24  AVGDPGMKRDGLRVAFEAWNFCNEVGFEAPHMGSPRAADCFDLSS 68


Top