BLASTX nr result
ID: Atractylodes21_contig00048203
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00048203
(303 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi... 98 8e-19
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ... 97 1e-18
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula] 97 1e-18
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,... 94 1e-17
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ... 89 5e-16
>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 97.8 bits (242), Expect = 8e-19
Identities = 48/100 (48%), Positives = 71/100 (71%)
Frame = +1
Query: 1 LYSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNS 180
+Y +C + + LA+LIFE S+ DVVLWSSII S+ +S K++ LFN+M+ E ++PN
Sbjct: 298 MYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSF-KALKLFNKMRTEEIEPNY 356
Query: 181 VTLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
VTLLAV++ACTN+ S+ G G+HGY+ K G +S+ N+
Sbjct: 357 VTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNA 396
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/99 (37%), Positives = 59/99 (59%)
Frame = +1
Query: 4 YSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNSV 183
Y +C DSL +A +F+ +VV W+++I+GC H++ E + + F MQ EGV PN V
Sbjct: 198 YFRCGDSL-MALRVFDGMEVKNVVSWTTMISGCIAHQDYDE-AFACFRAMQAEGVCPNRV 255
Query: 184 TLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
T +A+L+AC + G IHGY + G +S S +++
Sbjct: 256 TSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSA 294
>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 622
Score = 97.1 bits (240), Expect = 1e-18
Identities = 50/100 (50%), Positives = 69/100 (69%)
Frame = +1
Query: 1 LYSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNS 180
LY +C SL LA+ IFE S+ DVVLWSSII ++ ES +K++ LFN+M+ E +PN
Sbjct: 317 LYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGES-DKALKLFNKMRTEETEPNY 375
Query: 181 VTLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
VTLLAV++ACTN+ S G IHGY+LK G+ + + N+
Sbjct: 376 VTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNA 415
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = +1
Query: 4 YSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNSV 183
Y +C DSL +A+ +F+ + V W+++I+GC+ +++ + +++ + +MQ EGV PN V
Sbjct: 217 YFRCGDSL-MARSVFDEMEVKNEVSWTAVISGCANNQDY-DVALACYREMQVEGVSPNRV 274
Query: 184 TLLAVLTACTNIPSISLGSGIHGYVLKSGLDS 279
TL+A+L AC + G IHGY + G DS
Sbjct: 275 TLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 460
Score = 97.1 bits (240), Expect = 1e-18
Identities = 50/100 (50%), Positives = 69/100 (69%)
Frame = +1
Query: 1 LYSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNS 180
LY +C SL LA+ IFE S+ DVVLWSSII ++ ES +K++ LFN+M+ E +PN
Sbjct: 317 LYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGES-DKALKLFNKMRTEETEPNY 375
Query: 181 VTLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
VTLLAV++ACTN+ S G IHGY+LK G+ + + N+
Sbjct: 376 VTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNA 415
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/92 (36%), Positives = 58/92 (63%)
Frame = +1
Query: 4 YSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNSV 183
Y +C DSL +A+ +F+ + V W+++I+GC+ +++ + +++ + +MQ EGV PN V
Sbjct: 217 YFRCGDSL-MARSVFDEMEVKNEVSWTAVISGCANNQDY-DVALACYREMQVEGVSPNRV 274
Query: 184 TLLAVLTACTNIPSISLGSGIHGYVLKSGLDS 279
TL+A+L AC + G IHGY + G DS
Sbjct: 275 TLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 578
Score = 93.6 bits (231), Expect = 1e-17
Identities = 48/100 (48%), Positives = 66/100 (66%)
Frame = +1
Query: 1 LYSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNS 180
+Y + + L LAKL FE S DVV+WSSII + +S E ++ LF M+ +G +PNS
Sbjct: 273 IYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIE-ALKLFRWMRADGTEPNS 331
Query: 181 VTLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
VTLLAV+TACT + S+ G G HGY++K GL+ D I N+
Sbjct: 332 VTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNA 371
Score = 63.2 bits (152), Expect = 2e-08
Identities = 34/93 (36%), Positives = 52/93 (55%)
Frame = +1
Query: 4 YSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNSV 183
Y K DSL +A +F+ +VV W+++++GCS + + ++ F MQ GV+PN V
Sbjct: 173 YFKSGDSL-MALRVFDQIEVKNVVSWTALVSGCSANLDY-NMALDCFRAMQINGVRPNRV 230
Query: 184 TLLAVLTACTNIPSISLGSGIHGYVLKSGLDSD 282
TL+A+L A + G IHGY + G D D
Sbjct: 231 TLIAILPAFAELGCAKTGKEIHGYAFRHGFDLD 263
>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313151|gb|EFH43574.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 88.6 bits (218), Expect = 5e-16
Identities = 43/100 (43%), Positives = 74/100 (74%)
Frame = +1
Query: 1 LYSKCADSLPLAKLIFEISTQTDVVLWSSIIAGCSQHKESAEKSISLFNQMQKEGVQPNS 180
+Y +C S+ L++L+FE S DVV+WSS+I+G +++ + +E +++L +QM+KEG +PNS
Sbjct: 296 MYCRCG-SVSLSRLLFETSKVRDVVMWSSMISGYAENGDCSE-AMNLLSQMRKEGSEPNS 353
Query: 181 VTLLAVLTACTNIPSISLGSGIHGYVLKSGLDSDLSITNS 300
VTLLAV++ACT+ S+ + S +H +LK G S + ++N+
Sbjct: 354 VTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSNA 393