BLASTX nr result

ID: Atractylodes21_contig00048199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048199
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877616.1| cytidine/deoxycytidylate deaminase family pr...   286   2e-75
ref|NP_190423.2| dCMP deaminase [Arabidopsis thaliana] gi|918065...   281   6e-74
gb|ABK28591.1| unknown [Arabidopsis thaliana]                         281   6e-74
ref|XP_004145155.1| PREDICTED: deoxycytidylate deaminase-like [C...   278   4e-73
ref|XP_002322258.1| predicted protein [Populus trichocarpa] gi|2...   278   4e-73

>ref|XP_002877616.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297323454|gb|EFH53875.1|
           cytidine/deoxycytidylate deaminase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  286 bits (731), Expect = 2e-75
 Identities = 140/195 (71%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
 Frame = -3

Query: 576 MNSRDLTLIFTXXXXXXXXXXXXIRFLV----NPRKKLSTATSTSEYVLPRNSSPDDPYA 409
           MNSRDLTL+ T             RF      NP+ +  T T  +   +PR     DP++
Sbjct: 1   MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRRFTCTEIT--AIPRKFQDLDPFS 58

Query: 408 PSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKL 229
           P KRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQ+G+ILGIGYNGFPRGCSDDKL
Sbjct: 59  PLKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKL 118

Query: 228 PWSKKSKNGDPLETKYPYVCHAEVNCILNTNHASAAGQRLYVTMFPCNECAKVIIQSGVS 49
           PW+KKS+ GDPLETKYPYVCHAEVN ILNTNHASAAGQ+LYVTMFPCNECAK+I+QSGV+
Sbjct: 119 PWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVA 178

Query: 48  EVIYFVEKSLENSDV 4
           EVIYFVEK L +SDV
Sbjct: 179 EVIYFVEKRLNDSDV 193


>ref|NP_190423.2| dCMP deaminase [Arabidopsis thaliana] gi|91806546|gb|ABE66000.1|
           cytidine/deoxycytidylate deaminase family protein
           [Arabidopsis thaliana] gi|332644907|gb|AEE78428.1| dCMP
           deaminase [Arabidopsis thaliana]
          Length = 232

 Score =  281 bits (719), Expect = 6e-74
 Identities = 139/195 (71%), Positives = 155/195 (79%), Gaps = 4/195 (2%)
 Frame = -3

Query: 576 MNSRDLTLIFTXXXXXXXXXXXXIRFLV----NPRKKLSTATSTSEYVLPRNSSPDDPYA 409
           MNSRDLTL+ T             RF      NP+ +  T+T  S   + R     DP++
Sbjct: 1   MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRKFTSTEIS--AISRKFPALDPFS 58

Query: 408 PSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKL 229
           P KRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQ+G+ILGIGYNGFPRGCSDDKL
Sbjct: 59  PLKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKL 118

Query: 228 PWSKKSKNGDPLETKYPYVCHAEVNCILNTNHASAAGQRLYVTMFPCNECAKVIIQSGVS 49
           PW+KKS+ GDPLETKYPYVCHAEVN ILNTNHASAAGQ+LYVTMFPCNECAK+I+QSGV+
Sbjct: 119 PWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVA 178

Query: 48  EVIYFVEKSLENSDV 4
           EVIYFVEK   +SDV
Sbjct: 179 EVIYFVEKRPNDSDV 193


>gb|ABK28591.1| unknown [Arabidopsis thaliana]
          Length = 233

 Score =  281 bits (719), Expect = 6e-74
 Identities = 139/195 (71%), Positives = 155/195 (79%), Gaps = 4/195 (2%)
 Frame = -3

Query: 576 MNSRDLTLIFTXXXXXXXXXXXXIRFLV----NPRKKLSTATSTSEYVLPRNSSPDDPYA 409
           MNSRDLTL+ T             RF      NP+ +  T+T  S   + R     DP++
Sbjct: 1   MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRKFTSTEIS--AISRKFPALDPFS 58

Query: 408 PSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKL 229
           P KRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQ+G+ILGIGYNGFPRGCSDDKL
Sbjct: 59  PLKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKL 118

Query: 228 PWSKKSKNGDPLETKYPYVCHAEVNCILNTNHASAAGQRLYVTMFPCNECAKVIIQSGVS 49
           PW+KKS+ GDPLETKYPYVCHAEVN ILNTNHASAAGQ+LYVTMFPCNECAK+I+QSGV+
Sbjct: 119 PWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVA 178

Query: 48  EVIYFVEKSLENSDV 4
           EVIYFVEK   +SDV
Sbjct: 179 EVIYFVEKRPNDSDV 193


>ref|XP_004145155.1| PREDICTED: deoxycytidylate deaminase-like [Cucumis sativus]
           gi|449474257|ref|XP_004154120.1| PREDICTED:
           deoxycytidylate deaminase-like [Cucumis sativus]
           gi|449503680|ref|XP_004162123.1| PREDICTED:
           deoxycytidylate deaminase-like [Cucumis sativus]
          Length = 226

 Score =  278 bits (712), Expect = 4e-73
 Identities = 135/191 (70%), Positives = 151/191 (79%)
 Frame = -3

Query: 576 MNSRDLTLIFTXXXXXXXXXXXXIRFLVNPRKKLSTATSTSEYVLPRNSSPDDPYAPSKR 397
           MNSRDL L+ T             RF  +P+K  S    +    L  N S   P+ PSKR
Sbjct: 1   MNSRDLALVSTAAVLSAFTSAIACRFFFSPKKHRSRFDLSRNGALLNNGSSRCPFDPSKR 60

Query: 396 NGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWSK 217
            G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQ+G+ILGIGYNGFPRGCSDD+LPW+K
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 216 KSKNGDPLETKYPYVCHAEVNCILNTNHASAAGQRLYVTMFPCNECAKVIIQSGVSEVIY 37
           KSK  +PLETKYPYVCHAEVN ILNTNHASA+GQ+LYVTMFPCNECAK+IIQSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 36  FVEKSLENSDV 4
           FVEK + NS+V
Sbjct: 181 FVEKRINNSNV 191


>ref|XP_002322258.1| predicted protein [Populus trichocarpa] gi|222869254|gb|EEF06385.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  278 bits (712), Expect = 4e-73
 Identities = 141/196 (71%), Positives = 156/196 (79%), Gaps = 5/196 (2%)
 Frame = -3

Query: 576 MNSRDLTLIFTXXXXXXXXXXXXIRFLV----NPRKKLSTAT-STSEYVLPRNSSPDDPY 412
           MNSR+L L+ T            +RFL     N RK+L + T S     + +  S    +
Sbjct: 1   MNSRELALVSTATVFGALASAFAVRFLYFSNSNSRKRLLSKTKSVPNGDVSKKCSIQSQF 60

Query: 411 APSKRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDK 232
            PSKR  YLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQ+GIILGIGYNGFPRGCSDDK
Sbjct: 61  DPSKRKEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGIILGIGYNGFPRGCSDDK 120

Query: 231 LPWSKKSKNGDPLETKYPYVCHAEVNCILNTNHASAAGQRLYVTMFPCNECAKVIIQSGV 52
           LPW+KKSK+GDPLETKYPYVCHAEVN ILNTNHASAAGQ+LYVTMFPCNECAK+IIQSGV
Sbjct: 121 LPWAKKSKSGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 180

Query: 51  SEVIYFVEKSLENSDV 4
           SEVIYFVEK+L NSD+
Sbjct: 181 SEVIYFVEKNLNNSDI 196


Top