BLASTX nr result

ID: Atractylodes21_contig00048180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048180
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    84   9e-15
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...    82   5e-14
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    71   1e-10

>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
 Frame = +3

Query: 36   QTMMSASMLSGALGVN---LPEGNLLSVQGHVVAVHSSDQGRLVTRLSHRVFYGARH-HI 203
            +T M+ASM S     +   LPEGNL+S+QG V+AVH+ +   L   LS+  +   R   +
Sbjct: 1086 ETAMTASMQSFQTDDSAFLLPEGNLVSLQGQVLAVHNLNHTSLDAHLSNENYGDVRQLRL 1145

Query: 204  IPGVTNSVCIHVLVGHNTVKIYSSLSERSYPIGFGPGIKANFYRVL 341
              GVT S CIHVL+ H+ V I+  LSE +YP GFG G+ A F+R+L
Sbjct: 1146 SRGVTWSTCIHVLMDHHIVSIFGGLSEHAYPTGFGXGVVATFHRIL 1191


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
 Frame = +3

Query: 36   QTMMSASMLSGALGVN---LPEGNLLSVQGHVVAVHSSDQGRLVTRLSHRVFYGARH-HI 203
            +T M+ASM S     +   LPEGNL+S+QG V+AVH+ +   L    S+  +   R   +
Sbjct: 826  ETAMTASMQSFQTDDSAFLLPEGNLVSLQGQVLAVHNLNHTSLDAHSSNENYGDVRQLRL 885

Query: 204  IPGVTNSVCIHVLVGHNTVKIYSSLSERSYPIGFGPGIKANFYRVL 341
              GVT S CIHVL+ H+ V I+  LSE +YP GFG G+ A F+R+L
Sbjct: 886  SRGVTWSTCIHVLMDHHIVSIFGGLSEHAYPTGFGSGVVATFHRIL 931


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
            gi|223550977|gb|EEF52463.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1159

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
 Frame = +3

Query: 30   SPQTMMSASMLSGALGVNL-PEGNLLSVQGHVVAVHSSDQGRLVTRLS-HRVFYGARHHI 203
            S  ++ S+S+  G+L   + PEGNL SV G VVA+H  D       LS +R+        
Sbjct: 776  SNYSISSSSLSYGSLDYTVFPEGNLTSVHGDVVAIHGFDDNSADISLSCNRLGDVLDMRF 835

Query: 204  IPGVTNSVCIHVLVGHNTVKIYSSLSERSYPIGFGPGIKANFYRVL 341
              G T+  CIHVLV +  V I+ SLS+ + P+GFGP + A F+R+L
Sbjct: 836  SQGKTSGSCIHVLVDNQVVTIFGSLSKYALPVGFGPDVNATFHRIL 881


>ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|222844173|gb|EEE81720.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = +3

Query: 15  FNSSWSPQTMMSASMLSGALGVN---LPEGNLLSVQGHVVAVHSSDQGRLVTRLSHRVFY 185
           FN S    T MSAS    A   +    PEGNL+SV G+VVA H  +      + S     
Sbjct: 378 FNGSPHFMTKMSASSTPFASSNSCCVFPEGNLISVLGNVVAFHFLNSNLANAQSSCETVS 437

Query: 186 GARHH-IIPGVTNSVCIHVLVGHNTVKIYSSLSERSYPIGFGPGIKANFYRVL 341
              H     G+ +S C+HVLV    V+I+ SLS+ +Y +GFG G+ A F+RVL
Sbjct: 438 DIPHMGCFQGIPSSCCVHVLVDKQMVRIFGSLSKHAYAVGFGAGVNATFHRVL 490


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/85 (44%), Positives = 49/85 (57%)
 Frame = +3

Query: 87   PEGNLLSVQGHVVAVHSSDQGRLVTRLSHRVFYGARHHIIPGVTNSVCIHVLVGHNTVKI 266
            PEGNL SV+GHVVAVH   Q  + + L  +   G       G   S CIH+L+    VKI
Sbjct: 1020 PEGNLSSVKGHVVAVHDLHQSCIDSNLECQSIKGGLCRFPVG-GKSTCIHLLMEDQIVKI 1078

Query: 267  YSSLSERSYPIGFGPGIKANFYRVL 341
            +  L   + P+GFGPG+ A F+RVL
Sbjct: 1079 FGYLKNHALPVGFGPGVSATFHRVL 1103


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