BLASTX nr result

ID: Atractylodes21_contig00048132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048132
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    96   4e-18
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    96   4e-18
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    94   9e-18
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    75   4e-12
emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]    67   1e-09

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/95 (46%), Positives = 68/95 (71%)
 Frame = -1

Query: 293 LTWEQFTSELLQRFSGIDIQNPFEQLSTIQQVGSILDYIDDFEYLLSLVPRLPEKQSMGY 114
           L+WE+    L+ R+ G  ++NPFE+LSTI+Q GS+ ++++ FE L S V RLPE+Q +GY
Sbjct: 114 LSWEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGY 173

Query: 113 FIAGLRSEVKRWVHLHRPATRLEAMYLAKDVEEML 9
           F++GL+ +++R V    P  R++ M +AKDVEE L
Sbjct: 174 FMSGLKPQIRRRVRTLNPLNRMQMMRIAKDVEEEL 208


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/97 (44%), Positives = 71/97 (73%)
 Frame = -1

Query: 296  NLTWEQFTSELLQRFSGIDIQNPFEQLSTIQQVGSILDYIDDFEYLLSLVPRLPEKQSMG 117
            +L+ E+    L+ R+ G  ++NPFE+LST++Q+GS+ ++++ FE L S V RLPE+Q +G
Sbjct: 803  DLSREKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLG 862

Query: 116  YFIAGLRSEVKRWVHLHRPATRLEAMYLAKDVEEMLN 6
            YF++GL++ ++R V    P TR++ M +AKDVE+ LN
Sbjct: 863  YFMSGLKAHIRRRVRTLNPTTRMQMMRIAKDVEDELN 899


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/95 (45%), Positives = 67/95 (70%)
 Frame = -1

Query: 293 LTWEQFTSELLQRFSGIDIQNPFEQLSTIQQVGSILDYIDDFEYLLSLVPRLPEKQSMGY 114
           L+WE     L+ R+ G  ++NPFE+LST++Q GS+ ++++ FE L S V RLPE+Q +GY
Sbjct: 131 LSWENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGY 190

Query: 113 FIAGLRSEVKRWVHLHRPATRLEAMYLAKDVEEML 9
           F++GL+ +++R V    P  R+E M +AKDVE+ L
Sbjct: 191 FMSGLKPQIRRRVRTLNPRNRMEMMRIAKDVEDEL 225


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/70 (47%), Positives = 49/70 (70%)
 Frame = -1

Query: 293 LTWEQFTSELLQRFSGIDIQNPFEQLSTIQQVGSILDYIDDFEYLLSLVPRLPEKQSMGY 114
           LTWE     LL+R+ G+   N FEQLS +QQ G+I +YI DFE L++ +P+LP  Q +GY
Sbjct: 141 LTWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGY 200

Query: 113 FIAGLRSEVK 84
           F+ GL+ +++
Sbjct: 201 FVHGLKDKIR 210


>emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
          Length = 522

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/95 (38%), Positives = 55/95 (57%)
 Frame = -1

Query: 293 LTWEQFTSELLQRFSGIDIQNPFEQLSTIQQVGSILDYIDDFEYLLSLVPRLPEKQSMGY 114
           +TWE F  EL  RF  I+ ++  E LS ++Q+GS+ DY  +FE L + V    +K  +G 
Sbjct: 136 VTWELFEEELWARFGPIECEDFDEALSKVRQIGSLRDYQKEFERLGNRVHGWSQKALVGS 195

Query: 113 FIAGLRSEVKRWVHLHRPATRLEAMYLAKDVEEML 9
           F+ GLRSE+   + + +P T  EA  LA   +E L
Sbjct: 196 FMGGLRSEISETIRMFKPKTLKEATSLAHMKDEQL 230


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