BLASTX nr result

ID: Atractylodes21_contig00048095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048095
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]   197   1e-48
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...   174   9e-42
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  197 bits (500), Expect = 1e-48
 Identities = 95/134 (70%), Positives = 113/134 (84%)
 Frame = -2

Query: 402 QNHPSLDLLSKCKNMEEFKQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSYALSVFD 223
           QNHPSL LLS CK+ +  KQIH+Q+IK GLHNTQFALSK++ FCAI+ FG+LSYAL +F+
Sbjct: 31  QNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFE 90

Query: 222 TIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCARIDGTN 43
           +IE+P +Q +WNT+IRG SL+SSP  AIDFY  MLL GVEPNSYTFP LLKSCA++  T 
Sbjct: 91  SIEQP-NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149

Query: 42  EGKQIHGHVLKLGL 1
           EGKQIHGHVLKLGL
Sbjct: 150 EGKQIHGHVLKLGL 163



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = -2

Query: 255 GDLSYALSVFDTIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSL 76
           GDL  A  +F+ I E  D I WN +I GYS  +S   A+  +R M  S VEPN  TF S+
Sbjct: 313 GDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSI 371

Query: 75  LKSCARIDGTNEGKQIHGHVLK--LGL 1
           L +CA +   + GK IH ++ K  LGL
Sbjct: 372 LPACAYLGALDLGKWIHAYIDKKFLGL 398


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  197 bits (500), Expect = 1e-48
 Identities = 95/134 (70%), Positives = 113/134 (84%)
 Frame = -2

Query: 402 QNHPSLDLLSKCKNMEEFKQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSYALSVFD 223
           QNHPSL LLS CK+ +  KQIH+Q+IK GLHNTQFALSK++ FCAI+ FG+LSYAL +F+
Sbjct: 31  QNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFE 90

Query: 222 TIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCARIDGTN 43
           +IE+P +Q +WNT+IRG SL+SSP  AIDFY  MLL GVEPNSYTFP LLKSCA++  T 
Sbjct: 91  SIEQP-NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149

Query: 42  EGKQIHGHVLKLGL 1
           EGKQIHGHVLKLGL
Sbjct: 150 EGKQIHGHVLKLGL 163



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = -2

Query: 255 GDLSYALSVFDTIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSL 76
           GDL  A  +F+ I E  D I WN +I GYS  +S   A+  +R M  S VEPN  TF S+
Sbjct: 313 GDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSI 371

Query: 75  LKSCARIDGTNEGKQIHGHVLK--LGL 1
           L +CA +   + GK IH ++ K  LGL
Sbjct: 372 LPACAYLGALDLGKWIHAYIDKKFLGL 398


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/133 (60%), Positives = 103/133 (77%)
 Frame = -2

Query: 399 NHPSLDLLSKCKNMEEFKQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSYALSVFDT 220
           +HPSL LLS CK ++  KQIH+Q+IK GLHNT FALSK++ FCA++  GDLSYALS+F T
Sbjct: 28  DHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKT 87

Query: 219 IEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCARIDGTNE 40
           I  P + ++WN +IRG S + SPF A+++Y  M+ SG EPN YTFPS+ KSC +I G +E
Sbjct: 88  IRNP-NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHE 146

Query: 39  GKQIHGHVLKLGL 1
           GKQ+H HVLKLGL
Sbjct: 147 GKQVHAHVLKLGL 159



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/82 (35%), Positives = 49/82 (59%)
 Frame = -2

Query: 255 GDLSYALSVFDTIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSL 76
           GDL  A ++F+ I++  + + WN +I GY+  S    A+  +R M+ S ++PN  TF S+
Sbjct: 310 GDLEEASNLFEKIQDK-NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSI 368

Query: 75  LKSCARIDGTNEGKQIHGHVLK 10
           L +CA +   + GK +H +V K
Sbjct: 369 LPACANLGALDLGKWVHAYVDK 390


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/133 (62%), Positives = 104/133 (78%)
 Frame = -2

Query: 402 QNHPSLDLLSKCKNMEEFKQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSYALSVFD 223
           Q HPSL LLS CKN++  KQIH+Q+IK GLHNT FALSK++ FC I+ +GDLSYAL +F 
Sbjct: 23  QTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSYALLLFK 82

Query: 222 TIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCARIDGTN 43
           +I +P +QI+WN IIRG SL+ SP  AI +Y  M+ SG  PN+YT+P +LKSCARI  T+
Sbjct: 83  SIGKP-NQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSCARISSTH 141

Query: 42  EGKQIHGHVLKLG 4
           EGKQIHG +LKLG
Sbjct: 142 EGKQIHGQILKLG 154



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = -2

Query: 411 IPPQNHPSLDLLSKCKNMEEFKQ---IHAQMIKNGLHNTQFALSKILHFCAINTFGDLSY 241
           + P     L +LS C      K    + + + ++GL +    ++ ++   A    GDL  
Sbjct: 252 VTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYA--KCGDLEN 309

Query: 240 ALSVFDTIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCA 61
           AL +F+ I+   + I WN +I GY+  S    A+  +R ML S VEPN  T  S+L +CA
Sbjct: 310 ALHLFEGIKNK-NVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACA 368

Query: 60  RIDGTNEGKQIHGHVLK 10
            +     GK IH ++ K
Sbjct: 369 NLGALGLGKWIHAYIDK 385


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/133 (60%), Positives = 106/133 (79%)
 Frame = -2

Query: 402 QNHPSLDLLSKCKNMEEFKQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSYALSVFD 223
           Q HPSL LLSKC+++  FKQIHA +IK GLHNT FALSK++ F A++  GD+SYA+S+F+
Sbjct: 28  QEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFN 87

Query: 222 TIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCARIDGTN 43
           +IEE P+  +WN++IRG S++ SP  A+ F+  M+ SGVEPNSYTFP LLKSCA++   +
Sbjct: 88  SIEE-PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAH 146

Query: 42  EGKQIHGHVLKLG 4
           EGKQIH HVLKLG
Sbjct: 147 EGKQIHAHVLKLG 159



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
 Frame = -2

Query: 411 IPPQNHPSLDLLSKCKNMEEF---KQIHAQMIKNGLHNTQFALSKILHFCAINTFGDLSY 241
           +PP     + +LS C           + + +   GL +    ++ ++     +  GDL  
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDM--YSKCGDLQT 314

Query: 240 ALSVFDTIEEPPDQIMWNTIIRGYSLNSSPFSAIDFYRFMLLSGVEPNSYTFPSLLKSCA 61
           A  +FD + E  D I WN +I GY+   S   A+  +R ML SGVEP   TF S+L SCA
Sbjct: 315 ARELFDDMLER-DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCA 373

Query: 60  RIDGTNEGKQIHGHVLK 10
            +   + GK IH ++ K
Sbjct: 374 HLGAIDLGKWIHAYINK 390


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