BLASTX nr result

ID: Atractylodes21_contig00048091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048091
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315824.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002892815.1| hypothetical protein ARALYDRAFT_471628 [Arab...    72   6e-11
ref|XP_002875118.1| hypothetical protein ARALYDRAFT_484143 [Arab...    72   6e-11
ref|NP_027422.1| tobamovirus multiplication protein 3 [Arabidops...    71   8e-11
gb|AAM61605.1| unknown [Arabidopsis thaliana]                          70   1e-10

>ref|XP_002315824.1| predicted protein [Populus trichocarpa] gi|222864864|gb|EEF01995.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +1

Query: 43  GPSDSAVLIMYTLKDAHHWWHVLNDSPLWQDRIFHXXXXXXXXXXXXXXTQLIRIQLRVP 222
           G   +  +I + LK+A  WWH +N+SP WQDRIFH               QLIRIQLRVP
Sbjct: 7   GAEMAGTVISFKLKEASSWWHDINESPFWQDRIFHVLAALYGLVAAVAFIQLIRIQLRVP 66

Query: 223 EYGW 234
           EYGW
Sbjct: 67  EYGW 70


>ref|XP_002892815.1| hypothetical protein ARALYDRAFT_471628 [Arabidopsis lyrata subsp.
           lyrata] gi|297338657|gb|EFH69074.1| hypothetical protein
           ARALYDRAFT_471628 [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/62 (48%), Positives = 40/62 (64%)
 Frame = +1

Query: 49  SDSAVLIMYTLKDAHHWWHVLNDSPLWQDRIFHXXXXXXXXXXXXXXTQLIRIQLRVPEY 228
           S +A ++ + LK+A +WW  +N+SP+WQDRIFH               QL+RIQLRVPEY
Sbjct: 11  SSAAAIVAFNLKEATNWWSDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEY 70

Query: 229 GW 234
           GW
Sbjct: 71  GW 72


>ref|XP_002875118.1| hypothetical protein ARALYDRAFT_484143 [Arabidopsis lyrata subsp.
           lyrata] gi|297320956|gb|EFH51377.1| hypothetical protein
           ARALYDRAFT_484143 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/73 (45%), Positives = 43/73 (58%)
 Frame = +1

Query: 16  SPAMYRALVGPSDSAVLIMYTLKDAHHWWHVLNDSPLWQDRIFHXXXXXXXXXXXXXXTQ 195
           S  M  + +  S S+ + M  LK+A +WW  +N+SP+WQDRIFH               Q
Sbjct: 13  SEMMSSSSLSSSSSSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSVVAVIQ 72

Query: 196 LIRIQLRVPEYGW 234
           L+RIQLRVPEYGW
Sbjct: 73  LVRIQLRVPEYGW 85


>ref|NP_027422.1| tobamovirus multiplication protein 3 [Arabidopsis thaliana]
           gi|15425641|dbj|BAB64308.1| TOM3 [Arabidopsis thaliana]
           gi|20197487|gb|AAC97216.2| expressed protein
           [Arabidopsis thaliana] gi|26449544|dbj|BAC41898.1|
           unknown protein [Arabidopsis thaliana]
           gi|330250463|gb|AEC05557.1| tobamovirus multiplication
           protein 3 [Arabidopsis thaliana]
          Length = 303

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +1

Query: 37  LVGPSDSAVLIMYTLKDAHHWWHVLNDSPLWQDRIFHXXXXXXXXXXXXXXTQLIRIQLR 216
           ++  S S+ + M  LK+A +WW  +N+SP+WQDRIFH               QL+RIQLR
Sbjct: 15  MMSSSSSSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLR 74

Query: 217 VPEYGW 234
           VPEYGW
Sbjct: 75  VPEYGW 80


>gb|AAM61605.1| unknown [Arabidopsis thaliana]
          Length = 288

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/62 (50%), Positives = 39/62 (62%)
 Frame = +1

Query: 49  SDSAVLIMYTLKDAHHWWHVLNDSPLWQDRIFHXXXXXXXXXXXXXXTQLIRIQLRVPEY 228
           S S+ + M  LK+A +WW  +N+SP+WQDRIFH               QL+RIQLRVPEY
Sbjct: 4   SSSSAVEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEY 63

Query: 229 GW 234
           GW
Sbjct: 64  GW 65


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