BLASTX nr result

ID: Atractylodes21_contig00048027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00048027
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    89   3e-16
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    86   3e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    63   2e-08
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    58   7e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = -1

Query: 383 GSLHEQWLALNQVGSVIDYQRRFIELSAPLTNVSDEIALGHFINGLKNEIKAEVRLFGPR 204
           GSLHEQWL+  Q  SV +Y+R+F+E +APL  + +EI +G FI+GL  E+++E+R+  P 
Sbjct: 253 GSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPY 312

Query: 203 TVDQAMGLAINV-EKLRVNPIARRDSRFYSSSVGQSITNPRMSTPS 69
            +DQAM LA+ + E+ RVN   R   R  S S+     N   S PS
Sbjct: 313 NLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPS 358


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/112 (41%), Positives = 66/112 (58%)
 Frame = -1

Query: 383 GSLHEQWLALNQVGSVIDYQRRFIELSAPLTNVSDEIALGHFINGLKNEIKAEVRLFGPR 204
           GSL EQWL+  Q   V++Y+R+FIEL APL  + + IA   F++ LK EIK EVR+ GP 
Sbjct: 178 GSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPS 237

Query: 203 TVDQAMGLAINVEKLRVNPIARRDSRFYSSSVGQSITNPRMSTPSPVTGPHP 48
           ++D AM LA+ VE+ ++N   R   ++ S +   S  NP    P P     P
Sbjct: 238 SLDHAMELAVQVEE-KLN--HRPKKKWESKASSYSAHNPNSYIPKPTLSAKP 286


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -1

Query: 383 GSLHEQWLALNQVGSVIDYQRRFIELSAPLTNVSDEIALGHFINGLKNEIKAEVRL 216
           GSL EQW+  +Q GSV +Y+ RFIEL APL N+ + IA   FI+ LK EIK E+R+
Sbjct: 158 GSLQEQWMNHHQEGSVKEYKSRFIELMAPLDNIPENIAQAQFISKLKEEIKNEMRI 213


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/74 (35%), Positives = 52/74 (70%)
 Frame = -1

Query: 383 GSLHEQWLALNQVGSVIDYQRRFIELSAPLTNVSDEIALGHFINGLKNEIKAEVRLFGPR 204
           G+LH+Q LAL Q  +V +++R+F  ++APL  +++++    F+NGL+ +++AE+R + P 
Sbjct: 184 GTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPF 243

Query: 203 TVDQAMGLAINVEK 162
            +D+ M +A  +E+
Sbjct: 244 GLDKKMQVAQKIEE 257


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