BLASTX nr result

ID: Atractylodes21_contig00047434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047434
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   118   4e-25
emb|CBI29620.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   117   7e-25
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   104   8e-21
ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial pro...   104   8e-21

>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score =  118 bits (296), Expect = 4e-25
 Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
 Frame = -2

Query: 346 MNRRLTFFCHSILIN--------TSKPARKSIAINPGTNGFSLFRAFMYTSTRFDNNSKF 191
           M R    F H IL N        T+    K+  +NP  NGF+LFR   +T          
Sbjct: 1   MRRCFAVFTHRILNNYNPIGTTTTTFLYSKNCPLNPRINGFALFRLLSFTPMH------- 53

Query: 190 RRVNANSDPNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVC 11
                N DP+DP+TLMKEDGVSVCS++WIE+FR P++TV NLT+YLRRFELWVLAYQKV 
Sbjct: 54  ---RRNPDPDDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSYLRRFELWVLAYQKVS 110

Query: 10  ADE 2
           ADE
Sbjct: 111 ADE 113


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
 Frame = -2

Query: 367 AVLFSG*MNRRLTFFCHSILINTSKPARKSIAI-------NPGTNGFSLFRAFMYTSTRF 209
           AVL    + + +    H +L+N S  A  +  +       NP  NGFS FRAF + +   
Sbjct: 7   AVLAHRVLVKHVVLVNHVVLVNHSFSATNNFLLYAKSDFPNPRNNGFSFFRAFSFAAAN- 65

Query: 208 DNNSKFRRVNANSDPNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVL 29
                        DP+DPSTLMKEDGV++CS++WI++FR P+ TVTNLT++LRRFELWVL
Sbjct: 66  ---------RRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFELWVL 116

Query: 28  AYQKVCADE 2
           AYQKVCADE
Sbjct: 117 AYQKVCADE 125


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
 Frame = -2

Query: 367 AVLFSG*MNRRLTFFCHSILINTSKPARKSIAI-------NPGTNGFSLFRAFMYTSTRF 209
           AVL    + + +    H +L+N S  A  +  +       NP  NGFS FRAF + +   
Sbjct: 10  AVLAHRVLVKHVVLVNHVVLVNHSFSATNNFLLYAKSDFPNPRNNGFSFFRAFSFAAAN- 68

Query: 208 DNNSKFRRVNANSDPNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVL 29
                        DP+DPSTLMKEDGV++CS++WI++FR P+ TVTNLT++LRRFELWVL
Sbjct: 69  ---------RRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFELWVL 119

Query: 28  AYQKVCADE 2
           AYQKVCADE
Sbjct: 120 AYQKVCADE 128


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score =  104 bits (259), Expect = 8e-21
 Identities = 58/122 (47%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
 Frame = -2

Query: 346 MNRRLTFFCHSILINTSKPARKS----IAINP---GTNGFSLFRAFMYTSTRFDNNSKFR 188
           M+R +  F H I  ++S     S      +NP     +GF L R F +           R
Sbjct: 1   MHRGVFIFAHRIFASSSVVRTSSGFTFSELNPLKSSFHGFPLCRVFSFVPAH-------R 53

Query: 187 RVNANSDPNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVCA 8
           R     DPNDPS LMKEDG+S CS++WIE+FR P++ V+NLT YL++FELWVLAYQKVCA
Sbjct: 54  RA---PDPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAYQKVCA 110

Query: 7   DE 2
           DE
Sbjct: 111 DE 112


>ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 722

 Score =  104 bits (259), Expect = 8e-21
 Identities = 58/122 (47%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
 Frame = -2

Query: 346 MNRRLTFFCHSILINTSKPARKS----IAINP---GTNGFSLFRAFMYTSTRFDNNSKFR 188
           M+R +  F H I  ++S     S      +NP     +GF L R F +           R
Sbjct: 1   MHRGVFIFAHRIFASSSVVRTSSGFIFSELNPLKSSFHGFPLCRVFSFVPAH-------R 53

Query: 187 RVNANSDPNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVCA 8
           R     DPNDPS LMKEDG+S CS++WIE+FR P++ V+NLT YL++FELWVLAYQKVCA
Sbjct: 54  RA---PDPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAYQKVCA 110

Query: 7   DE 2
           DE
Sbjct: 111 DE 112


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