BLASTX nr result

ID: Atractylodes21_contig00047422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047422
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    96   4e-18
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...    91   1e-16

>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = +2

Query: 2   WEKVIEMRKLMKEKGIQTTPSASTIEVKGERHEFRVDDTSHSRINEVYEMMDEIEMQLKI 181
           W+KV E+RK MKEKGIQTTP++S+IE+KG+ HEF VDD SH + +E+YEM+DEI  QLKI
Sbjct: 346 WKKVTELRKFMKEKGIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKI 405

Query: 182 AGYVAEIT 205
           AGYVAEIT
Sbjct: 406 AGYVAEIT 413


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = +2

Query: 2   WEKVIEMRKLMKEKGIQTTPSASTIEVKGERHEFRVDDTSHSRINEVYEMMDEIEMQLKI 181
           W+KV ++RK MKEKGIQT+P  STIE+KG+ HEF VDD  H R +E+YEM+DEI  QLKI
Sbjct: 490 WDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKI 549

Query: 182 AGYVAEIT 205
           AGYVAE++
Sbjct: 550 AGYVAELS 557


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/68 (67%), Positives = 53/68 (77%)
 Frame = +2

Query: 2   WEKVIEMRKLMKEKGIQTTPSASTIEVKGERHEFRVDDTSHSRINEVYEMMDEIEMQLKI 181
           WEKV E+RKLMK K IQTTP  STIE+KG  HEF VDD SHSR  E+YE +DEI  QL+I
Sbjct: 426 WEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRI 485

Query: 182 AGYVAEIT 205
           AGYV E++
Sbjct: 486 AGYVVELS 493


>ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g47530-like [Glycine max]
          Length = 515

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/68 (66%), Positives = 54/68 (79%)
 Frame = +2

Query: 2   WEKVIEMRKLMKEKGIQTTPSASTIEVKGERHEFRVDDTSHSRINEVYEMMDEIEMQLKI 181
           WEKV E+RKLMK K IQTTP  STIE+KG  HEF VDD SH+R +E+YE +DEI  QL+I
Sbjct: 362 WEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRI 421

Query: 182 AGYVAEIT 205
           AGYV E++
Sbjct: 422 AGYVVELS 429


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/68 (64%), Positives = 51/68 (75%)
 Frame = +2

Query: 2   WEKVIEMRKLMKEKGIQTTPSASTIEVKGERHEFRVDDTSHSRINEVYEMMDEIEMQLKI 181
           WEKV E+R LMK+K IQT P  S IE++G  HEF VDD SH R  E+Y+M+ EI  QLKI
Sbjct: 437 WEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKI 496

Query: 182 AGYVAEIT 205
           AGYVAEIT
Sbjct: 497 AGYVAEIT 504


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