BLASTX nr result

ID: Atractylodes21_contig00047392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047392
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...   221   6e-56
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   217   9e-55
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   217   9e-55
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi...   214   6e-54
emb|CBI15551.3| unnamed protein product [Vitis vinifera]              214   6e-54

>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 763

 Score =  221 bits (562), Expect = 6e-56
 Identities = 101/125 (80%), Positives = 112/125 (89%)
 Frame = -1

Query: 376  KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
            KIH+FSVGD  HPE  RI+A+LEELD ++++EGY+SS KLVLHDVEEEEKEHMLKYHSEK
Sbjct: 639  KIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEK 698

Query: 196  LAVAFGILNTQAGRPIRVFKNLRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVCS 17
            LAVAFGIL   AGRPIRV KNLRVC DCHN IKHISKIVGRLII+RDSHRFHHF +G+CS
Sbjct: 699  LAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICS 758

Query: 16   CGDYW 2
            CGDYW
Sbjct: 759  CGDYW 763


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355525106|gb|AET05560.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  217 bits (552), Expect = 9e-55
 Identities = 99/125 (79%), Positives = 110/125 (88%)
 Frame = -1

Query: 376  KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
            KIH+FSVGD +HPE  RI+AYLEELD ++++EGY+S  KLVLHDVEEEEKEHMLKYHSEK
Sbjct: 642  KIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEK 701

Query: 196  LAVAFGILNTQAGRPIRVFKNLRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVCS 17
            LAVAFGIL    GRPIRV KNLRVC DCH+ IKHISKIVGRLII+RDSHRFHHF +G CS
Sbjct: 702  LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 16   CGDYW 2
            CGDYW
Sbjct: 762  CGDYW 766



 Score =  110 bits (275), Expect = 1e-22
 Identities = 63/126 (50%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
 Frame = -1

Query: 376  KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
            KIH+FSVG     E   I  +LEELD ++++               EEEKE  LKY SE 
Sbjct: 873  KIHTFSVGLFLSRERENI-GFLEELDLKMRER--------------EEEKERTLKYLSEN 917

Query: 196  LAVAFGILNTQAGRPIRVFKN-LRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVC 20
            LA A GIL    GRP RV K  + VC DC + IKH+SKIVGRLI +RDSHRF+   + +C
Sbjct: 918  LAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDSHRFN---ESIC 974

Query: 19   SCGDYW 2
            SCG+YW
Sbjct: 975  SCGEYW 980


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  217 bits (552), Expect = 9e-55
 Identities = 99/125 (79%), Positives = 110/125 (88%)
 Frame = -1

Query: 376  KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
            KIH+FSVGD +HPE  RI+AYLEELD ++++EGY+S  KLVLHDVEEEEKEHMLKYHSEK
Sbjct: 642  KIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEK 701

Query: 196  LAVAFGILNTQAGRPIRVFKNLRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVCS 17
            LAVAFGIL    GRPIRV KNLRVC DCH+ IKHISKIVGRLII+RDSHRFHHF +G CS
Sbjct: 702  LAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCS 761

Query: 16   CGDYW 2
            CGDYW
Sbjct: 762  CGDYW 766


>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 750

 Score =  214 bits (545), Expect = 6e-54
 Identities = 97/125 (77%), Positives = 110/125 (88%)
 Frame = -1

Query: 376  KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
            KIH+F+VGD  HPE  RI+A+LEELD ++K EGY+SS KLVLHDVEEEEK+HMLKYHSEK
Sbjct: 626  KIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEK 685

Query: 196  LAVAFGILNTQAGRPIRVFKNLRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVCS 17
            LAVAFGIL   +G+PIRV KNLRVC DCHN IKHISKIVGRLIIVRDSHR+HHF +G+CS
Sbjct: 686  LAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICS 745

Query: 16   CGDYW 2
            C DYW
Sbjct: 746  CRDYW 750


>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/125 (79%), Positives = 109/125 (87%)
 Frame = -1

Query: 376 KIHSFSVGDSTHPETARIHAYLEELDFRLKQEGYISSPKLVLHDVEEEEKEHMLKYHSEK 197
           KIH+F+VGDS HPE  RI+ +LEELD ++K+EGY+SS KLVLHDVEEEEK HMLKYHSEK
Sbjct: 561 KIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEK 620

Query: 196 LAVAFGILNTQAGRPIRVFKNLRVCTDCHNVIKHISKIVGRLIIVRDSHRFHHFKDGVCS 17
           LAVAFGIL   AGRPIRV KNLRVC DCHN +KHISKIVGRLII+RDSHRFHHF  G CS
Sbjct: 621 LAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCS 680

Query: 16  CGDYW 2
           CGDYW
Sbjct: 681 CGDYW 685


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