BLASTX nr result

ID: Atractylodes21_contig00047356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047356
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]    50   6e-07
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   1e-06

>emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]
          Length = 1795

 Score = 50.1 bits (118), Expect(2) = 6e-07
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 174  PD-CPLCSDVVESVQHRFLQCVFSYRIWEALFR*WGWDIHPNITLNDLFE-SINVHDLKP 347
            PD C LC    ES  H FL C  +  +W  LF+    D  P ++++D+   + N   L  
Sbjct: 1700 PDICKLCMRHEESTDHLFLHCSSTMELWHRLFQLAKTDWVPPMSISDMLSTNYNGFGLSK 1759

Query: 348  QHRKFWKATIYSVVYFIWKSRNQKI 422
                 W+AT  ++++ +W+ RN +I
Sbjct: 1760 GGTVLWQATCIAIIWVVWRERNARI 1784



 Score = 28.1 bits (61), Expect(2) = 6e-07
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 53   LEKIDWSLKIPLKVSIFVWKLRNNGVHVKE 142
            L K  W+ +IP KV  FVW + +  V+  +
Sbjct: 1658 LTKFXWNSQIPFKVKSFVWLVAHKKVNTND 1687


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
 Frame = +3

Query: 180  CPLCSDVVESVQHRFLQCVFSYRIWEALFR*W--GWDIHPNITLNDLFESINVHDLKPQH 353
            C  CS  +ES  H FL+C +S  +W   F+ W   W +  +I   +LF     H + P  
Sbjct: 1090 CIFCSSSIESTNHLFLECSYSKELWHWWFQIWNVAWVLPSSI--KELF----THWIPPFK 1143

Query: 354  RKF----WKATIYSVVYFIWKSRNQKI 422
             KF    W +  + +++ IWK RN +I
Sbjct: 1144 GKFFKKVWMSCFFIILWTIWKERNSRI 1170



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 68   WSLKIPLKVSIFVWKLRNNGVHVKEKIL 151
            W   +P ++ IFVW +    ++ KEK+L
Sbjct: 1051 WKGLVPFRIEIFVWFVILGRLNTKEKLL 1078


Top