BLASTX nr result

ID: Atractylodes21_contig00047318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047318
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   126   2e-27
ref|NP_001141248.1| uncharacterized protein LOC100273335 [Zea ma...   125   4e-27
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   125   5e-27
ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244...   124   6e-27
ref|NP_001132375.1| uncharacterized protein LOC100193821 [Zea ma...   124   1e-26

>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/66 (87%), Positives = 64/66 (96%)
 Frame = +3

Query: 9   ESKKFGKGPKELTGAVDLINHYKLLPHYEFFCKKSLPLSISDTHYLRNVVGDTEIRKGEG 188
           E KKFG+GP+ELTGAVDLI+HYKLLPH++FFCKKSLPLSISDTHYL NVVGDTEIRKGEG
Sbjct: 4   EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 189 MQLDQL 206
           MQL+QL
Sbjct: 64  MQLNQL 69


>ref|NP_001141248.1| uncharacterized protein LOC100273335 [Zea mays]
           gi|194703522|gb|ACF85845.1| unknown [Zea mays]
           gi|195623978|gb|ACG33819.1| hypothetical protein [Zea
           mays] gi|414878016|tpg|DAA55147.1| TPA: hypothetical
           protein ZEAMMB73_954433 [Zea mays]
           gi|414878017|tpg|DAA55148.1| TPA: hypothetical protein
           ZEAMMB73_954433 [Zea mays]
          Length = 218

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = +3

Query: 3   DLESKKFGKGPKELTGAVDLINHYKLLPHYEFFCKKSLPLSISDTHYLRNVVGDTEIRKG 182
           D + KKFG GP+ELTGAVDLINHYKLLPH++FFCKK LPL+ISDTHYL N+VGDTEIRKG
Sbjct: 2   DSDDKKFGNGPRELTGAVDLINHYKLLPHHDFFCKKPLPLAISDTHYLHNIVGDTEIRKG 61

Query: 183 EGMQLDQL 206
           EGM+LDQL
Sbjct: 62  EGMELDQL 69


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/68 (83%), Positives = 65/68 (95%)
 Frame = +3

Query: 3   DLESKKFGKGPKELTGAVDLINHYKLLPHYEFFCKKSLPLSISDTHYLRNVVGDTEIRKG 182
           D ESKKFG GP+ELTGAVDLI+H+KL+PH+EFFCK+SLPLSISDTHYL NVVGD+EIRKG
Sbjct: 2   DPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKG 61

Query: 183 EGMQLDQL 206
           +GMQLDQL
Sbjct: 62  DGMQLDQL 69


>ref|XP_002280511.1| PREDICTED: uncharacterized protein LOC100244629 [Vitis vinifera]
           gi|297740784|emb|CBI30966.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/68 (83%), Positives = 65/68 (95%)
 Frame = +3

Query: 3   DLESKKFGKGPKELTGAVDLINHYKLLPHYEFFCKKSLPLSISDTHYLRNVVGDTEIRKG 182
           D + KKFGKGP+EL+GAVDLINHYKLLPH+EFFCK+SLPLSIS+THYLR+VVG TEIRKG
Sbjct: 2   DADYKKFGKGPRELSGAVDLINHYKLLPHHEFFCKRSLPLSISETHYLRSVVGGTEIRKG 61

Query: 183 EGMQLDQL 206
           EGM+LDQL
Sbjct: 62  EGMELDQL 69


>ref|NP_001132375.1| uncharacterized protein LOC100193821 [Zea mays]
           gi|195655369|gb|ACG47152.1| hypothetical protein [Zea
           mays]
          Length = 205

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = +3

Query: 3   DLESKKFGKGPKELTGAVDLINHYKLLPHYEFFCKKSLPLSISDTHYLRNVVGDTEIRKG 182
           D + KKFG GP+ELTGAVDLI+HYKLLPH++FFCKK LPL+ISDTHYL NVVGDTEIRKG
Sbjct: 2   DSDDKKFGNGPRELTGAVDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKG 61

Query: 183 EGMQLDQL 206
           EGM+LDQL
Sbjct: 62  EGMELDQL 69


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