BLASTX nr result

ID: Atractylodes21_contig00047315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047315
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 154   7e-36
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 141   5e-32
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   140   1e-31
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   140   1e-31
dbj|BAB88749.1| integrase [Silene latifolia]                          137   9e-31

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  154 bits (389), Expect = 7e-36
 Identities = 73/108 (67%), Positives = 89/108 (82%)
 Frame = +1

Query: 1    RRFIKNFSTIVAPMTEVTKFKTFTWTPQAQKAFDELKQQLSSTPVLALPCFQEVFEVECD 180
            RRFIKNFST+VAP+TE  +   F WT QAQ++F+++KQ + +TP+L LP F ++FEVECD
Sbjct: 857  RRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFEVECD 916

Query: 181  ASGVGIRAVLSQLNRPIAYFSEKLNDAKRRYSTYDKEFYAIIRALDHW 324
            ASGVGI AVL Q  +P+AYFSEKLN AK +YSTYDKEFYAIIRAL HW
Sbjct: 917  ASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRALMHW 964


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/108 (61%), Positives = 87/108 (80%)
 Frame = +1

Query: 1    RRFIKNFSTIVAPMTEVTKFKTFTWTPQAQKAFDELKQQLSSTPVLALPCFQEVFEVECD 180
            RRFIK+FST++AP+TE  K   F W  +A+ +F+ +K++L  +P+L LP F ++FEVECD
Sbjct: 845  RRFIKDFSTLMAPITECMKKGEFKWGDKAESSFNIIKEKLCESPILTLPNFNKLFEVECD 904

Query: 181  ASGVGIRAVLSQLNRPIAYFSEKLNDAKRRYSTYDKEFYAIIRALDHW 324
            ASG+GI AVL Q ++PIAYFSEKL+ AK  YSTYDKEFYAI+RAL+HW
Sbjct: 905  ASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRALNHW 952


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +1

Query: 1    RRFIKNFSTIVAPMTEVTKFKTFTWTPQAQKAFDELKQQLSSTPVLALPCFQEVFEVECD 180
            RRFI+NFS+I+AP+TE  K   F WT  A KAF+E+K ++ + P+L LP F++VFEV CD
Sbjct: 864  RRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACD 923

Query: 181  ASGVGIRAVLSQLNRPIAYFSEKLNDAKRRYSTYDKEFYAIIRALDHW 324
            AS VGI AVLSQ   P+A+FSEKLN AK++YSTYD EFYA+++A+ HW
Sbjct: 924  ASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHW 971


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +1

Query: 1    RRFIKNFSTIVAPMTEVTKFKTFTWTPQAQKAFDELKQQLSSTPVLALPCFQEVFEVECD 180
            RRFI+NFS+I+AP+TE  K   F WT  A KAF+E+K ++ + P+L LP F++VFEV CD
Sbjct: 789  RRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACD 848

Query: 181  ASGVGIRAVLSQLNRPIAYFSEKLNDAKRRYSTYDKEFYAIIRALDHW 324
            AS VGI AVLSQ   P+A+FSEKLN AK++YSTYD EFYA+++A+ HW
Sbjct: 849  ASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHW 896


>dbj|BAB88749.1| integrase [Silene latifolia]
          Length = 282

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/108 (60%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   RRFIKNFSTIVAPMTEVTKFKTFTWTPQAQKAFDELKQQLSSTPVLALPCFQEVFEVECD 180
           RR  +  S++VAP+TE  K   F WT  AQ++F+ +K+ +  TP+L LP F ++FEVECD
Sbjct: 49  RRLSRTSSSVVAPITECMKKGEFHWTESAQQSFERIKKLMCETPILKLPDFDQLFEVECD 108

Query: 181 ASGVGIRAVLSQLNRPIAYFSEKLNDAKRRYSTYDKEFYAIIRALDHW 324
           ASGVGI AVL Q  +P+AYFSEKLN AK +YSTYDKEFYAIIRA+ HW
Sbjct: 109 ASGVGIGAVLIQAQKPVAYFSEKLNGAKLKYSTYDKEFYAIIRAVMHW 156


Top