BLASTX nr result

ID: Atractylodes21_contig00047275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047275
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]   106   2e-21
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   100   9e-20
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   100   2e-19
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   100   2e-19
ref|XP_004173307.1| PREDICTED: uncharacterized protein LOC101226...    98   6e-19

>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/103 (52%), Positives = 70/103 (67%)
 Frame = +1

Query: 13  YRRKTLKVHQNPKLSARCYGPYRVLERIGAVAYRFELPDTATIHPVFHVSQLRRAIGQNL 192
           Y +K+L   +N KLS   YGP+ +  R+G VAYR  LP ++TIHP+FH+SQLR+A+G   
Sbjct: 669 YCQKSLAKRRNEKLSPWYYGPFPIEARVGMVAYRLTLPPSSTIHPMFHISQLRKAVGTAP 728

Query: 193 SSNKLPPQLTEEMEFQVEPEDILVVRHGSGGNTSYPEVLVKWK 321
           +S+ LP QLT EME  VEP  IL VR    G+T   EVLV+WK
Sbjct: 729 TSSSLPSQLTAEMELLVEPRTILGVRQCLTGSTFVTEVLVQWK 771


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/104 (45%), Positives = 68/104 (65%)
 Frame = +1

Query: 13   YRRKTLKVHQNPKLSARCYGPYRVLERIGAVAYRFELPDTATIHPVFHVSQLRRAIGQNL 192
            YR+++L      KL+ R YGP+ VL+RIGA AY+ +LP ++ IHPVFHVS L++ +G   
Sbjct: 1464 YRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTP 1523

Query: 193  SSNKLPPQLTEEMEFQVEPEDILVVRHGSGGNTSYPEVLVKWKG 324
                +PP +  +ME  VEPE++L VR    G  ++ E L+KWKG
Sbjct: 1524 VLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKG 1567


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/102 (46%), Positives = 67/102 (65%)
 Frame = +1

Query: 13   YRRKTLKVHQNPKLSARCYGPYRVLERIGAVAYRFELPDTATIHPVFHVSQLRRAIGQNL 192
            YR ++L   +N KL+ R YGP+ VL+RIG VAY+ +LP  A +HPVFH+SQL++A+G   
Sbjct: 1397 YRHQSLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQ 1456

Query: 193  SSNKLPPQLTEEMEFQVEPEDILVVRHGSGGNTSYPEVLVKW 318
            SS  +PPQLT ++    +PE +L +R          EVL+KW
Sbjct: 1457 SSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKW 1498


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/104 (46%), Positives = 71/104 (68%)
 Frame = +1

Query: 13   YRRKTLKVHQNPKLSARCYGPYRVLERIGAVAYRFELPDTATIHPVFHVSQLRRAIGQNL 192
            YR+ ++   +N KLS R +GP++VL RIG VAY+ +LP+ +TIHPVFHVSQL+RA+  + 
Sbjct: 1490 YRQSSVAHRKNEKLSQRYFGPFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQLKRAVPPSF 1549

Query: 193  SSNKLPPQLTEEMEFQVEPEDILVVRHGSGGNTSYPEVLVKWKG 324
            +  +LP  L+  +E+   PE +L +R  +    S PEVLV+W G
Sbjct: 1550 TPQELPKILSPTLEWNTGPEKLLDIRQSN--TNSGPEVLVQWSG 1591


>ref|XP_004173307.1| PREDICTED: uncharacterized protein LOC101226267 [Cucumis sativus]
          Length = 233

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/104 (46%), Positives = 70/104 (67%)
 Frame = +1

Query: 13  YRRKTLKVHQNPKLSARCYGPYRVLERIGAVAYRFELPDTATIHPVFHVSQLRRAIGQNL 192
           YR+ +L+  +N KLS + +GP ++++RIG VAYR ELP  ATIHPVFH+SQL+RA G++ 
Sbjct: 123 YRQASLRRKRNEKLSPKYFGPCKIVKRIGQVAYRLELPTAATIHPVFHISQLKRAFGESA 182

Query: 193 SSNKLPPQLTEEMEFQVEPEDILVVRHGSGGNTSYPEVLVKWKG 324
           +S +L P LT   E++  P+++   R    G     EVL+ WKG
Sbjct: 183 NSEELLPFLTANHEWKAVPQEVYGYRKNEKGGW---EVLMSWKG 223


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