BLASTX nr result

ID: Atractylodes21_contig00047240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047240
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796...    89   3e-16
emb|CBI37806.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258...    86   3e-15
emb|CAN83259.1| hypothetical protein VITISV_032134 [Vitis vinifera]    86   3e-15
ref|XP_003614202.1| RNA polymerase II-associated protein [Medica...    86   4e-15

>ref|XP_003517858.1| PREDICTED: uncharacterized protein LOC100796310 [Glycine max]
          Length = 1614

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = -2

Query: 238 EQVSTSLESEIDAENRAQLEKMSTDEIAEAQAEIRKKMNPALIKILQKRGQDKMRKKKNS 59
           E+ S SLESEIDAENRAQ+++MS +EIAEAQAEI +KM+PAL+K LQKRGQDK++K K+ 
Sbjct: 294 EKESVSLESEIDAENRAQIQQMSAEEIAEAQAEIMEKMSPALLKALQKRGQDKLKKLKSE 353

Query: 58  FSTAIGSIGKTVDN 17
             T   S+   V +
Sbjct: 354 VGTGSDSVNGHVQS 367


>emb|CBI37806.3| unnamed protein product [Vitis vinifera]
          Length = 1505

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/62 (69%), Positives = 55/62 (88%)
 Frame = -2

Query: 238 EQVSTSLESEIDAENRAQLEKMSTDEIAEAQAEIRKKMNPALIKILQKRGQDKMRKKKNS 59
           +Q S +LES+IDAENRAQLE+MS +EIAEAQAEI +KMNP L+K+L+KRGQDK++K+K S
Sbjct: 221 DQGSMTLESQIDAENRAQLERMSHEEIAEAQAEIMEKMNPTLLKMLKKRGQDKLKKQKCS 280

Query: 58  FS 53
            S
Sbjct: 281 GS 282


>ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258889 [Vitis vinifera]
          Length = 1602

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/62 (69%), Positives = 55/62 (88%)
 Frame = -2

Query: 238 EQVSTSLESEIDAENRAQLEKMSTDEIAEAQAEIRKKMNPALIKILQKRGQDKMRKKKNS 59
           +Q S +LES+IDAENRAQLE+MS +EIAEAQAEI +KMNP L+K+L+KRGQDK++K+K S
Sbjct: 259 DQGSMTLESQIDAENRAQLERMSHEEIAEAQAEIMEKMNPTLLKMLKKRGQDKLKKQKCS 318

Query: 58  FS 53
            S
Sbjct: 319 GS 320


>emb|CAN83259.1| hypothetical protein VITISV_032134 [Vitis vinifera]
          Length = 1444

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/62 (69%), Positives = 55/62 (88%)
 Frame = -2

Query: 238 EQVSTSLESEIDAENRAQLEKMSTDEIAEAQAEIRKKMNPALIKILQKRGQDKMRKKKNS 59
           +Q S +LES+IDAENRAQLE+MS +EIAEAQAEI +KMNP L+K+L+KRGQDK++K+K S
Sbjct: 229 DQGSMTLESQIDAENRAQLERMSHEEIAEAQAEIMEKMNPTLLKMLKKRGQDKLKKQKCS 288

Query: 58  FS 53
            S
Sbjct: 289 GS 290


>ref|XP_003614202.1| RNA polymerase II-associated protein [Medicago truncatula]
           gi|355515537|gb|AES97160.1| RNA polymerase II-associated
           protein [Medicago truncatula]
          Length = 1563

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/75 (53%), Positives = 65/75 (86%)
 Frame = -2

Query: 238 EQVSTSLESEIDAENRAQLEKMSTDEIAEAQAEIRKKMNPALIKILQKRGQDKMRKKKNS 59
           EQ STSLE+EID+ENRA++++MST+EI EA+A+I +K++PAL+K+LQKRG++K+ KK NS
Sbjct: 236 EQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKL-KKPNS 294

Query: 58  FSTAIGSIGKTVDNK 14
             + +G++ ++V+ +
Sbjct: 295 LKSEVGAVTESVNQQ 309


Top