BLASTX nr result

ID: Atractylodes21_contig00047159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047159
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...    64   3e-21
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    75   5e-21
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]    89   5e-16
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    75   6e-12
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]    74   1e-11

>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score = 63.5 bits (153), Expect(3) = 3e-21
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 415 KKLVDGIPTLQHIHEDVICQGCQYGKSHRLPF-KSSSNQRTALFELVHVDLMGPTKTTSC 239
           K++V G+P      E+ +C  C  GK  R    K S+ + T + +LVH D+ GP    S 
Sbjct: 453 KEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPAST 512

Query: 238 SGYHYTMLLVDDFSRYSWVYFLKEE 164
           SG  Y +  +DDFSR  W Y L E+
Sbjct: 513 SGKRYILNFIDDFSRKCWTYLLSEK 537



 Score = 57.0 bits (136), Expect(3) = 3e-21
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -3

Query: 183 YIS*KRSEALVKFVEFNKVVKGEFGQKIVCLRSDNGGEFMLDEFFQYCDDSGIQRQM 13
           Y+  ++SE    F EF   V+ E G+K+VCLRSD GGE+   EF +YC + GI+RQ+
Sbjct: 532 YLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQL 588



 Score = 26.2 bits (56), Expect(3) = 3e-21
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = -3

Query: 528 FVMSAGEAYVKKTSQTNSVPI-------WHARLGHVGYQLLQQI 418
           FV+ A     K+T +T  + +       WH R GH+ +Q L+ +
Sbjct: 407 FVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSL 450


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 75.1 bits (183), Expect(2) = 5e-21
 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -2

Query: 415 KKLVDGIPTLQHIHEDVICQGCQYGKSHRLPFKSSSNQR-TALFELVHVDLMGPTKTTSC 239
           K +V G+P ++ +    +C+GC YGK  R  F    + R T   ELVH DL GP K  S 
Sbjct: 463 KDMVIGLPNIKELD---LCEGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESL 519

Query: 238 SGYHYTMLLVDDFSRYSWVYFLK 170
            G  Y ++  DD+SR+SWVYFLK
Sbjct: 520 GGSRYFLMFTDDYSRFSWVYFLK 542



 Score = 50.8 bits (120), Expect(2) = 5e-21
 Identities = 21/55 (38%), Positives = 36/55 (65%)
 Frame = -3

Query: 168 RSEALVKFVEFNKVVKGEFGQKIVCLRSDNGGEFMLDEFFQYCDDSGIQRQMMCP 4
           +SE    F +F   V+ + G KI  LR+D GGEF+ ++F  +C+++GI+R++  P
Sbjct: 544 KSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFCEENGIRRELTAP 598


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/84 (45%), Positives = 55/84 (65%)
 Frame = -2

Query: 415 KKLVDGIPTLQHIHEDVICQGCQYGKSHRLPFKSSSNQRTALFELVHVDLMGPTKTTSCS 236
           K ++ G+P L+ + +D IC GC YGK+H+LP++ S  +     EL+H D+ GP K  S S
Sbjct: 474 KSMLKGLPQLE-VRKDTICAGCXYGKAHQLPYEESKWKTKGPLELIHSDVFGPVKXASLS 532

Query: 235 GYHYTMLLVDDFSRYSWVYFLKEE 164
           G  Y    +DDFSRY WV+F+KE+
Sbjct: 533 GMKYMXTFIDDFSRYVWVHFMKEK 556


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -2

Query: 427 ATNIKKLVDGIPTLQH-IHEDVICQGCQYGKSHRLPFKSSSNQRTALFELVHVDLMGPTK 251
           A NI K +     + H  H++ +C  CQ+ KSH+LPF  S ++ +  F L+H DL GPT 
Sbjct: 182 ADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVSVSRASHPFALLHADLWGPTS 241

Query: 250 TTSCSGYHYTMLLVDDFSRYSWVY 179
             S +G  Y +L VDDFS +SW+Y
Sbjct: 242 IPSTTGARYFILFVDDFSHFSWIY 265



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 SQTNSVPIWHARLGHVGYQLLQQI*RNWLMAYQLF--NTSMKT*SAKAVNMANHIVFPSK 316
           S T    +WH+RLGH    +L+ I  +  +++Q    N       AK+  +  ++     
Sbjct: 166 SLTTITTLWHSRLGHPADNILKHILTSCNISHQCHKNNVCCACQFAKSHKLPFNVSVSRA 225

Query: 315 VRQIKERHCSNW--FMLISWDQQRQQVAVVTTIPCC*WMTFPGIAGYIS*KRSEALVKFV 142
                  H   W    + S    R  +  V       W+       Y    + +AL  F+
Sbjct: 226 SHPFALLHADLWGPTSIPSTTGARYFILFVDDFSHFSWI-------YPLHSKDQALSXFI 278

Query: 141 EFNKVVKGEFGQKIVCLRSDNGGEFMLDEFFQYCDDSGIQRQMMCP 4
           +F  +V+ +F  +I CLRSDNGGEF    F  Y    GI+ Q  CP
Sbjct: 279 KFKSLVENQFNSRIQCLRSDNGGEF--KAFSSYLATHGIKSQFSCP 322


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -2

Query: 421 NIKKLVDGIPTLQHIHEDVICQGCQYGKSHRLPFKSSSNQRTAL-FELVHVDLMGPTKTT 245
           N  +LV G+P + +  +D IC+ CQ GK  +  FK+ +   T+   EL+H+DL GP++T 
Sbjct: 620 NKDELVRGLPKI-NFQKDKICEACQMGKQIKNSFKNKNFISTSRPLELLHMDLFGPSRTP 678

Query: 244 SCSGYHYTMLLVDDFSRYSWVYFLKEE 164
           S  G  Y  ++VDDFSRY+WV FL ++
Sbjct: 679 SLGGKSYAYVIVDDFSRYTWVLFLSQK 705


Top